RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 PCDHGA11Q9Y5H2 935 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 CHD8Q9HCK8 2581 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 STMND1H3BQB6 276 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 TXNDC9O14530 226 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 TLX3O43711 291 aaPredicted RBP29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 NAA20P61599 178 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 PWP1Q13610 501 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 GGTA1PQ4G0N0 100 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 RHBDD2Q6NTF9 364 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 TTLQ8NG68 377 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 HUS1BQ8NHY5 278 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 PPP1R14CQ8TAE6 165 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 NT5CQ8TCD5 201 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 MTERF1Q99551 399 aaKnown RBP29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 NPHS1O60500 1241 aa29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 SH3BGRLO75368 114 aa29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 ESRRBO95718 433 aa29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 CAPNS1P04632 268 aa29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 CAPN1P07384 714 aa29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 RORAP35398 523 aa29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 FOXA1P55317 472 aa29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 PKNOX1P55347 436 aa29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 PPP2R2AP63151 447 aa29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 TMEM214Q6NUQ4 689 aaKnown RBP29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 WDR20Q8TBZ3 569 aa29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 ZNF473Q8WTR7 871 aaKnown RBP29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 TXLNGQ9NUQ3 528 aa29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 ACSL6Q9UKU0 697 aa29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 SRPK3Q9UPE1 567 aa29.11■■■□□ 2.25
CSNK1E-206ENST00000413574 NEFHP12036 1026 aa29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 HNRNPH1P31943 449 aaKnown RBP29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 ATP1A2P50993 1020 aa29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 ARSFP54793 590 aa29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 RGS1Q08116 209 aa29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 TGIF1Q15583 401 aa29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 FAM214AQ32MH5 1076 aa29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 SGO1Q5FBB7 561 aa29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 ARL13AQ5H913 290 aaPredicted RBP29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 TTC19Q6DKK2 380 aaPredicted RBP29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 C6orf15Q6UXA7 325 aaPredicted RBP29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 SLC6A16Q9GZN6 736 aa29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 ZNF395Q9H8N7 513 aaPredicted RBP29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 FARSBQ9NSD9 589 aaKnown RBP29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 STK38LQ9Y2H1 464 aa29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 TIMM22Q9Y584 194 aa29.1■■■□□ 2.25
CSNK1E-206ENST00000413574 CLEC3AO75596 197 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 SERPINA6P08185 405 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 CD82P27701 267 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 RCN2Q14257 317 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 TOR1AIP1Q5JTV8 583 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 LCN10Q6JVE6 187 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 FAM199XQ6PEV8 388 aaPredicted RBP29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 UNQ6494/PRO21346Q6UXR6 183 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 PRSS41Q7RTY9 318 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 METTL6Q8TCB7 284 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 FGF11Q92914 225 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 NAF1Q96HR8 494 aaKnown RBP29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 C4orf51C9J302 202 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 MEN1O00255 615 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 DSCR3O14972 297 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 B3GALT4O96024 378 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 TGFB1P01137 390 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 HBQ1P09105 142 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 GSTM2P28161 218 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 MUM1Q2TAK8 710 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 FRG2Q64ET8 278 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 ZNF385CQ66K41 422 aaPredicted RBP29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 CUZD1Q86UP6 607 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 DSELQ8IZU8 1212 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 ZDHHC19Q8WVZ1 309 aaPredicted RBP29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 REPS1Q96D71 796 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 GBP5Q96PP8 586 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 FRG2BQ96QU4 278 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 TRMOQ9BU70 441 aa29.09■■■□□ 2.25
CSNK1E-206ENST00000413574 LAMA5O15230 3695 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 LRIT2A6NDA9 550 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 MAGEB17A8MXT2 336 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 IQCJ-SCHIP1C9J366 451 aaPredicted RBP29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 H3BQF6 201 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 ITM2AO43736 263 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 RAD1O60671 282 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 LYPLA1O75608 230 aaPredicted RBP29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 SERPINE1P05121 402 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 ITGAXP20702 1163 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 MANEAQ5SRI9 462 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 YOD1Q5VVQ6 348 aaPredicted RBP29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 DTX1Q86Y01 620 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 NLGN4XQ8N0W4 816 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 NLGN4YQ8NFZ3 816 aaPredicted RBP29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 SEC16BQ96JE7 1060 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 MAGEB10Q96LZ2 347 aaPredicted RBP29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 F2RL3Q96RI0 385 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 HBEGFQ99075 208 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 DMRT3Q9NQL9 472 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 DKK4Q9UBT3 224 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 MAU2Q9Y6X3 613 aa29.08■■■□□ 2.25
CSNK1E-206ENST00000413574 IGF2RP11717 2491 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 A0A0A6YYC8 382 aaPredicted RBP29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 A0A1B0GX78 115 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 I3L1I5 382 aaPredicted RBP29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms