RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 GDAP1Q8TB36 358 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 FNDC8Q8TC99 324 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 MAGOHBQ96A72 148 aaKnown RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 VPS33AQ96AX1 596 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 LRRC45Q96CN5 670 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 DGCR14Q96DF8 476 aaKnown RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 ABHD8Q96I13 439 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 CAPZA3Q96KX2 299 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 SPATA17Q96L03 361 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 QRFPRQ96P65 431 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 OLFM3Q96PB7 478 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 GSDMAQ96QA5 445 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 RAB3IPQ96QF0 476 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 MTERF1Q99551 399 aaKnown RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 LITAFQ99732 161 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 EGFL8Q99944 293 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 DDX47Q9H0S4 455 aaKnown RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 NEUROG2Q9H2A3 272 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 NHEJ1Q9H9Q4 299 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 LRRC4Q9HBW1 653 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 NOX4Q9NPH5 578 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 PIH1D3Q9NQM4 214 aaKnown RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 OLAHQ9NV23 265 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 ETNK2Q9NVF9 386 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 HAO2Q9NYQ3 351 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 TAS2R14Q9NYV8 317 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 PTTG2Q9NZH5 202 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 AIPL1Q9NZN9 384 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 C1RLQ9NZP8 487 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 RCC2Q9P258 522 aaKnown RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 STX18Q9P2W9 335 aaKnown RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 LNPEPQ9UIQ6 1025 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 RWDD2AQ9UIY3 292 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 PADI3Q9ULW8 664 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 VDAC3Q9Y277 283 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 ARL2BPQ9Y2Y0 163 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 FAM32AQ9Y421 112 aaKnown RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 FADS3Q9Y5Q0 445 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 SNX9Q9Y5X1 595 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 PRSS21Q9Y6M0 314 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 PDS5AQ29RF7 1337 aaKnown RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 STK36Q9NRP7 1315 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 NID2Q14112 1375 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 PALLDQ8WX93 1383 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 DISP2A7MBM2 1401 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 NFAT5O94916 1531 aa2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 FAM208AQ9UK61 1670 aaKnown RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 DDX60Q8IY21 1712 aaKnown RBP2.31□□□□□ -2.04
HMGB3P2-201ENST00000411913 EDDM13A0A1B0GTR0 161 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 A0A1W2PP11 408 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 SH3PXD2BA1X283 911 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZSCAN5CA6NGD5 496 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 URADA6NGE7 173 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 TMEM189-UBE2V1I3L0A0 370 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZBTB43O43298 467 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 RAD51CO43502 376 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 PFDN1O60925 122 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 SUPT3HO75486 399 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 KDM4BO94953 1096 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 TRUB2O95900 331 aaKnown RBP2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 AGTP01019 485 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 RPN1P04843 607 aaKnown RBP2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 CD48P09326 243 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 HMOX1P09601 288 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 UBTFL1P0CB47 393 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 GSTT2P0CG29 244 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 GSTT2BP0CG30 244 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 IFNAR1P17181 557 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 S1PR1P21453 382 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 S100A1P23297 94 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 HPDP32754 393 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 CYLC1P35663 651 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 IL15P40933 162 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 RAB28P51157 221 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 MTTPP55157 894 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 ADARP55265 1226 aaKnown RBP2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 CDH13P55290 713 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 ARPC4P59998 168 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 GUCY2DQ02846 1103 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 RELAQ04206 551 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 SLC34A1Q06495 639 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 PPIDQ08752 370 aaKnown RBP2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZNF155Q12901 538 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 UBE2V1Q13404 147 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 PPIGQ13427 754 aaKnown RBP eCLIP2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 ITGA7Q13683 1181 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 RCN2Q14257 317 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 MELKQ14680 651 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 COG2Q14746 738 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 NR1D2Q14995 579 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 INAQ16352 499 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 NDUFA5Q16718 116 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 IMMTQ16891 758 aaKnown RBP2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 LETM2Q2VYF4 491 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 CCDC14Q49A88 953 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 CFAP221Q4G0U5 840 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 RAB6CQ53S08 254 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 KRBOX4Q5JUW0 171 aa2.3□□□□□ -2.04
HMGB3P2-201ENST00000411913 ARMC4Q5T2S8 1044 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms