RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 NCR3O14931 201 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 RS1O15537 224 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ERI3O43414 337 aaKnown RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ITM2AO43736 263 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 YPEL1O60688 119 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 BCAS1O75363 584 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 RENP00797 406 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 C1QBP02746 253 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 PCCAP05165 728 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ALPPP05187 535 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 LCKP06239 509 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 CTSGP08311 255 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 FGFR1P11362 822 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 GYS1P13807 737 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF25P17030 456 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 XBP1P17861 261 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ALOX12P18054 663 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 TSPAN8P19075 237 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 GABRR1P24046 479 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ADRA1DP25100 572 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 MAPK1P28482 360 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 MAPK4P31152 587 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 GDI2P50395 445 aaKnown RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 PDE6CP51160 858 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 CCR6P51684 374 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 JAK3P52333 1124 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 LBX1P52954 281 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ARSFP54793 590 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 CASP7P55210 303 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 UCP3P55916 312 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 RIPPLY3P57055 190 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 RPL8P62917 257 aaKnown RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 SQSTM1Q13501 440 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 FGL2Q14314 439 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 PCBP1Q15365 356 aaKnown RBP eCLIP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 CST6Q15828 149 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 CLEC12BQ2HXU8 276 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 MTHFSDQ2M296 383 aaKnown RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 C15orf59Q2T9L4 293 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 FUT11Q495W5 492 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 GTDC1Q4AE62 458 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ITPRIPL1Q6GPH6 555 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 FRMPD2BQ6IN97 320 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 TYW3Q6IPR3 259 aaKnown RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 DENND1BQ6P3S1 775 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 PGM2L1Q6PCE3 622 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 SOSTDC1Q6X4U4 206 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 CCDC81Q6ZN84 652 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 TMEM136Q6ZRR5 245 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 C2orf91Q6ZV80 131 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF429Q86V71 674 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 C17orf82Q86X59 251 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 FAM131BQ86XD5 332 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC41A1Q8IVJ1 513 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 Q8N9W7 124 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 NUP37Q8NFH4 326 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 OR6F1Q8NGZ6 308 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 SAP25Q8TEE9 199 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 IRGQQ8WZA9 623 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 RGP1Q92546 391 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 NDRG1Q92597 394 aaKnown RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 NSMAFQ92636 917 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 NEIL2Q969S2 332 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 SH3KBP1Q96B97 665 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF274Q96GC6 653 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 CDHR1Q96JP9 859 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 SNX22Q96L94 193 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 KCNA7Q96RP8 456 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 SULT4A1Q9BR01 284 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 PTDSS2Q9BVG9 487 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF717Q9BY31 904 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 FRMD8P1Q9BZ68 369 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 TRIM5Q9C035 493 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 NMUR2Q9GZQ4 415 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 FAM49AQ9H0Q0 323 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 SAV1Q9H4B6 383 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ECT2Q9H8V3 914 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 JPT2Q9H910 190 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 FKRPQ9H9S5 495 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC52A2Q9HAB3 445 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 NEK6Q9HC98 313 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 PCDH12Q9NPG4 1184 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 RNF186Q9NXI6 227 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 NDE1Q9NXR1 346 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 RBAKQ9NYW8 714 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 PKD2L2Q9NZM6 624 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 SIX4Q9UIU6 781 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 HOOK1Q9UJC3 728 aaKnown RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 TUBD1Q9UJT1 453 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF346Q9UL40 294 aaKnown RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 HSF4Q9ULV5 492 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 WDR83OSQ9Y284 106 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 DHRS7Q9Y394 339 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 SRPRBQ9Y5M8 271 aaKnown RBP-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 CYP46A1Q9Y6A2 500 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 CDY2AQ9Y6F7 541 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 COLEC10Q9Y6Z7 277 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 VPS13CQ709C8 3753 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 MUC3AQ02505 3323 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 SNRNP200O75643 2136 aaKnown RBP-1.79□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms