RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PCDHGA2Q9Y5H1 932 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 TNFRSF21O75509 655 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 PARNO95453 639 aaKnown RBP16.06■□□□□ 0.16
LIMS2-208ENST00000410011 ITGA2P17301 1181 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 HLA-FP30511 346 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 TMED10P49755 219 aaKnown RBP16.06■□□□□ 0.16
LIMS2-208ENST00000410011 TIGD6Q17RP2 521 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.06■□□□□ 0.16
LIMS2-208ENST00000410011 CATSPEREQ5SY80 951 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 GPR153Q6NV75 609 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 C1orf52Q8N6N3 182 aaKnown RBP16.06■□□□□ 0.16
LIMS2-208ENST00000410011 AMER2Q8N7J2 671 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.06■□□□□ 0.16
LIMS2-208ENST00000410011 CRELD1Q96HD1 420 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 COL21A1Q96P44 957 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 OR4K3Q96R72 315 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 TMEM38AQ9H6F2 299 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 CCDC59Q9P031 241 aaKnown RBP16.06■□□□□ 0.16
LIMS2-208ENST00000410011 STOX2Q9P2F5 926 aaPredicted RBP16.06■□□□□ 0.16
LIMS2-208ENST00000410011 MGAT4DA6NG13 374 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 AGAP5A6NIR3 686 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 COQ9O75208 318 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 RPLP0P05388 317 aaKnown RBP16.06■□□□□ 0.16
LIMS2-208ENST00000410011 CYP2A6P11509 494 aaPredicted RBP16.06■□□□□ 0.16
LIMS2-208ENST00000410011 POLR2EP19388 210 aaKnown RBP16.06■□□□□ 0.16
LIMS2-208ENST00000410011 TIA1P31483 386 aaKnown RBP eCLIP16.06■□□□□ 0.16
LIMS2-208ENST00000410011 HMGA2P52926 109 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 OLR1P78380 273 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 ZNF45Q02386 682 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 GAB1Q13480 694 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 MICAQ29983 383 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 IFI44LQ53G44 452 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 GAREM2Q75VX8 874 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 SLC22A16Q86VW1 577 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 NLRP8Q86W28 1048 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 SLC39A11Q8N1S5 342 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 TRAM1L1Q8N609 369 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 OR7G3Q8NG95 312 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 OR10G2Q8NGC3 310 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 EFHD2Q96C19 240 aaPredicted RBP16.06■□□□□ 0.16
LIMS2-208ENST00000410011 ZDHHC6Q9H6R6 413 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 SLC25A13Q9UJS0 675 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 KLK4Q9Y5K2 254 aa16.06■□□□□ 0.16
LIMS2-208ENST00000410011 NUP214P35658 2090 aaPredicted RBP16.06■□□□□ 0.16
LIMS2-208ENST00000410011 UPK3BL1B0FP48 263 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 UPK3BL2E5RIL1 263 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 ETHE1O95571 254 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 CKMP06732 381 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 GABRR2P28476 465 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 C21orf33P30042 268 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-208ENST00000410011 PRKCDQ05655 676 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 FCHO2Q0JRZ9 810 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 NAE1Q13564 534 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 DNASE1L3Q13609 305 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 IRF3Q14653 427 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 GDPD4Q6W3E5 623 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 SNX29P2Q8IUI4 249 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 LYSMD2Q8IV50 215 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 OR52N2Q8NGI0 321 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 TMEM169Q96HH4 297 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 KCNC2Q96PR1 638 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 HMX1Q9NP08 348 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-208ENST00000410011 TMEM184CQ9NVA4 438 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 GPATCH2Q9NW75 528 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 ENOPH1Q9UHY7 261 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 PLK4O00444 970 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 PCDH7O60245 1069 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 VIPP01282 170 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 CATP04040 527 aaKnown RBP16.05■□□□□ 0.16
LIMS2-208ENST00000410011 VIPR1P32241 457 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 SLC19A1P41440 591 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 SYT16Q17RD7 645 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 PRSS36Q5K4E3 855 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.05■□□□□ 0.16
LIMS2-208ENST00000410011 GPR65Q8IYL9 337 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 SLC5A8Q8N695 610 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 KBTBD8Q8NFY9 601 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 HUS1BQ8NHY5 278 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 C9orf43Q8TAL5 461 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-208ENST00000410011 MAL2Q969L2 176 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 REPS1Q96D71 796 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 WDR34Q96EX3 536 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 ABHD8Q96I13 439 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 ZSCAN5AQ9BUG6 496 aa16.05■□□□□ 0.16
LIMS2-208ENST00000410011 ZBTB20Q9HC78 741 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-208ENST00000410011 EXO1Q9UQ84 846 aaKnown RBP16.05■□□□□ 0.16
LIMS2-208ENST00000410011 GPC6Q9Y625 555 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-208ENST00000410011 MN1Q10571 1320 aaPredicted RBP16.04■□□□□ 0.16
LIMS2-208ENST00000410011 FOXE1O00358 373 aaPredicted RBP16.04■□□□□ 0.16
LIMS2-208ENST00000410011 AOC2O75106 756 aa16.04■□□□□ 0.16
LIMS2-208ENST00000410011 EIF2S1P05198 315 aaKnown RBP16.04■□□□□ 0.16
LIMS2-208ENST00000410011 URODP06132 367 aa16.04■□□□□ 0.16
LIMS2-208ENST00000410011 RPL3P39023 403 aaKnown RBP16.04■□□□□ 0.16
LIMS2-208ENST00000410011 CRB2Q5IJ48 1285 aa16.04■□□□□ 0.16
LIMS2-208ENST00000410011 HENMT1Q5T8I9 393 aaKnown RBP16.04■□□□□ 0.16
LIMS2-208ENST00000410011 CCDC103Q8IW40 242 aa16.04■□□□□ 0.16
LIMS2-208ENST00000410011 FBXO15Q8NCQ5 510 aaPredicted RBP16.04■□□□□ 0.16
LIMS2-208ENST00000410011 OR4A15Q8NGL6 344 aa16.04■□□□□ 0.16
LIMS2-208ENST00000410011 SPPL2AQ8TCT8 520 aa16.04■□□□□ 0.16
LIMS2-208ENST00000410011 ZNF675Q8TD23 568 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms