RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SFTPCP11686 197 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 SERPINB1P30740 379 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 OTX2P32243 289 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 RRADP55042 308 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 PHEXP78562 749 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 NFKB2Q00653 900 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 IL10RAQ13651 578 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 GTF2H2Q13888 395 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 NKG7Q16617 165 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 TBR1Q16650 682 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 ATP1A1-AS1Q5TC04 95 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 GTF2H2CQ6P1K8 395 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.36□□□□□ -0.75
CHMP3-205ENST00000409810 ARHGEF39Q8N4T4 335 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 MREGQ8N565 214 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 TEX9Q8N6V9 391 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 PTGR2Q8N8N7 351 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-205ENST00000409810 ANKRD53Q8N9V6 530 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 ZNF740Q8NDX6 193 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 EPS8L3Q8TE67 593 aaKnown RBP10.36□□□□□ -0.75
CHMP3-205ENST00000409810 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-205ENST00000409810 CCT6BQ92526 530 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 NACC2Q96BF6 587 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 REPS1Q96D71 796 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 PHF21BQ96EK2 531 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 ADNPQ9H2P0 1102 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 SLC22A11Q9NSA0 550 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 TRPC4Q9UBN4 977 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 CTSFQ9UBX1 484 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 RAB21Q9UL25 225 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 COL6A6A6NMZ7 2263 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 IGLV3-12A0A075B6K2 115 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 A0A088AWK7 358 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 VSTM2BA6NLU5 285 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 GOLGA8RI6L899 631 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 PEX12O00623 359 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 PCDH17O14917 1159 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 FOXS1O43638 330 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 CLEC3AO75596 197 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 ZGLP1P0C6A0 271 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 PYGBP11216 843 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 ALOX12P18054 663 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 IL1RNP18510 177 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 ZNF10P21506 573 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-205ENST00000409810 EEF1DP29692 281 aaKnown RBP10.35□□□□□ -0.75
CHMP3-205ENST00000409810 ARL1P40616 181 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-205ENST00000409810 HNF4AP41235 474 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 CASP2P42575 452 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 CCT5P48643 541 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 PCDH1Q08174 1060 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 TGM3Q08188 693 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 COL9A2Q14055 689 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-205ENST00000409810 DOC2AQ14183 400 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 LIPJQ5W064 366 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 GRHL2Q6ISB3 625 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 MED27Q6P2C8 311 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 TMEM102Q8N9M5 508 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-205ENST00000409810 KCT2Q8NC54 265 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 STT3BQ8TCJ2 826 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 ADAMTS17Q8TE56 1095 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 MZB1Q8WU39 189 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 ATP6V1E2Q96A05 226 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 MAGEB10Q96LZ2 347 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-205ENST00000409810 FER1L6-AS2Q96M78 137 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 SPSB2Q99619 263 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 MACROD1Q9BQ69 325 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 CRB3Q9BUF7 120 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 ROPN1BQ9BZX4 212 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-205ENST00000409810 SLC6A16Q9GZN6 736 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 SOX17Q9H6I2 414 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-205ENST00000409810 ROPN1Q9HAT0 212 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-205ENST00000409810 SEMA3GQ9NS98 782 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 ADGRE2Q9UHX3 823 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 G3BP2Q9UN86 482 aaKnown RBP10.35□□□□□ -0.75
CHMP3-205ENST00000409810 ASB1Q9Y576 335 aa10.35□□□□□ -0.75
CHMP3-205ENST00000409810 TLDC2A0PJX2 215 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 E2F3O00716 465 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 CNOT3O75175 753 aaKnown RBP10.34□□□□□ -0.75
CHMP3-205ENST00000409810 ERLIN1O75477 346 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 WFS1O76024 890 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 KLHL18O94889 574 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 SIX3O95343 332 aaPredicted RBP10.34□□□□□ -0.75
CHMP3-205ENST00000409810 CYC1P08574 325 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 FURINP09958 794 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 ZNF888P0CJ79 500 aaPredicted RBP10.34□□□□□ -0.75
CHMP3-205ENST00000409810 EPORP19235 508 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 IL10P22301 178 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 MMP11P24347 488 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 CCNG1P51959 295 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 POLE2P56282 527 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 E2F2Q14209 437 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 RBBP7Q16576 425 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 CCDC153Q494R4 210 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 TOR1AIP1Q5JTV8 583 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 TRIM40Q6P9F5 258 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 MED25Q71SY5 747 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 GOLGA7Q7Z5G4 137 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 MRGPREQ86SM8 312 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 MYLK4Q86YV6 388 aaPredicted RBP10.34□□□□□ -0.75
CHMP3-205ENST00000409810 SLC22A9Q8IVM8 553 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms