RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 SUMF1Q8NBK3 374 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 OR7A2PQ8NGA2 310 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 OR2A1Q8NGT9 310 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 CXorf40BQ96DE9 158 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ZNF184Q99676 751 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 PRRX2Q99811 253 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ECSITQ9BQ95 431 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 EFHD1Q9BUP0 239 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 REXO4Q9GZR2 422 aaKnown RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 DUSP15Q9H1R2 295 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 MCM8Q9UJA3 840 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 RIMS3Q9UJD0 308 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 PNMA8BQ9ULN7 279 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 PCDHB14Q9Y5E9 798 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 SLCO1B1Q9Y6L6 691 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 GNG14A0A1W2PPG7 69 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ANKDD1BA6NHY2 528 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 H7BY64 318 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 PRICKLE3O43900 615 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 PEX1O43933 1283 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 SCN2BO60939 215 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ATP6V1C1P21283 382 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ACTR1BP42025 376 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 WNT3P56703 355 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ACTR1AP61163 376 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 CSNK1G2P78368 415 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 DUOXA1Q1HG43 343 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 HKDC1Q2TB90 917 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 PLK5Q496M5 336 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 OGFRL1Q5TC84 451 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 SPPL2CQ8IUH8 684 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 KBTBD2Q8IY47 623 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 PHACTR4Q8IZ21 702 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 OR13H1Q8NG92 308 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 SLCO4A1Q96BD0 722 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 BIRC7Q96CA5 298 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 NAF1Q96HR8 494 aaKnown RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ZNF583Q96ND8 569 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 PRAP1Q96NZ9 151 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 PRPF18Q99633 342 aaKnown RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 CPPED1Q9BRF8 314 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 INPP5KQ9BT40 448 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 GPR174Q9BXC1 333 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 KLHL4Q9C0H6 718 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 TMEM168Q9H0V1 697 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 COPS7BQ9H9Q2 264 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ARMC1Q9NVT9 282 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 AHSPQ9NZD4 102 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ATP6V1HQ9UI12 483 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 MAGEL2Q9UJ55 1249 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 HCN4Q9Y3Q4 1203 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 EP300Q09472 2414 aaPredicted RBP13.49□□□□□ -0.25
LIMS2-206ENST00000409754 GVINP1Q7Z2Y8 2422 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 A6NCN8 305 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 RFXANKO14593 260 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 CCNDBP1O95273 360 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 EML2O95834 649 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 TNFP01375 233 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 CAPNS1P04632 268 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 PEX2P28328 305 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 PTPN6P29350 595 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 SHMT2P34897 504 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 OR4D2P58180 307 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 LPAL2Q16609 132 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 GTDC1Q4AE62 458 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 CPTPQ5TA50 214 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 DEPDC1Q5TB30 811 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 LPCAT4Q643R3 524 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 PMS2CLQ68D20 193 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 DNAJC14Q6Y2X3 702 aaPredicted RBP13.49□□□□□ -0.25
LIMS2-206ENST00000409754 SLC9B2Q86UD5 537 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 ANKRD46Q86W74 232 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 LILRA2Q8N149 483 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 ANKRD53Q8N9V6 530 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 TNIP2Q8NFZ5 429 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 CCL4L1Q8NHW4 92 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 CDC26Q8NHZ8 85 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 WDR48Q8TAF3 677 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 FAM174AQ8TBP5 190 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 COQ8BQ96D53 544 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 ZNF570Q96NI8 536 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 CCDC115Q96NT0 180 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 GBP5Q96PP8 586 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 PKP2Q99959 881 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 THUMPD3Q9BV44 507 aaKnown RBP13.49□□□□□ -0.25
LIMS2-206ENST00000409754 DUSP26Q9BV47 211 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 MS4A8Q9BY19 250 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 MYNNQ9NPC7 610 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 GPR27Q9NS67 375 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 CCM2LQ9NUG4 571 aaPredicted RBP13.49□□□□□ -0.25
LIMS2-206ENST00000409754 OR6C2Q9NZP2 312 aa13.49□□□□□ -0.25
LIMS2-206ENST00000409754 RIF1Q5UIP0 2472 aaKnown RBP13.48□□□□□ -0.25
LIMS2-206ENST00000409754 IGKV1-8A0A0C4DH67 115 aa13.48□□□□□ -0.25
LIMS2-206ENST00000409754 PRAMEF33A0A0G2JMD5 474 aa13.48□□□□□ -0.25
LIMS2-206ENST00000409754 A0A1W2PPC4 97 aa13.48□□□□□ -0.25
LIMS2-206ENST00000409754 DHRS12A0PJE2 317 aa13.48□□□□□ -0.25
LIMS2-206ENST00000409754 GABRR3A8MPY1 467 aa13.48□□□□□ -0.25
LIMS2-206ENST00000409754 SAP18O00422 153 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms