RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ZDHHC2Q9UIJ5 367 aa15.78■□□□□ 0.12
TSPAN4-208ENST00000409531 ZNF490Q9ULM2 529 aaPredicted RBP15.78■□□□□ 0.12
TSPAN4-208ENST00000409531 PKD1L2Q7Z442 2459 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 B4E171 279 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 LCMT2O60294 686 aaKnown RBP15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 NRP2O60462 931 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 PRAMEF10O60809 474 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 VIMP08670 466 aaKnown RBP15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 BCL6P41182 706 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 TSPAN7P41732 249 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 TCTE1Q5JU00 501 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 CLEC6AQ6EIG7 209 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 RNF165Q6ZSG1 346 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 PLD3Q8IV08 490 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 MCATQ8IVS2 390 aaKnown RBP15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 ANKRD53Q8N9V6 530 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 CAMKVQ8NCB2 501 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 WDR20Q8TBZ3 569 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 PIWIL2Q8TC59 973 aaKnown RBP15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 AGR3Q8TD06 166 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 SELENOMQ8WWX9 145 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 CCT6BQ92526 530 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 KCNA7Q96RP8 456 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 DPH1Q9BZG8 443 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 SLCO1B3Q9NPD5 702 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 SLC39A1Q9NY26 324 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 VTI1BQ9UEU0 232 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 ACSL6Q9UKU0 697 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 FIS1Q9Y3D6 152 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 TIMM22Q9Y584 194 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 PCDHGA3Q9Y5H0 932 aa15.77■□□□□ 0.12
TSPAN4-208ENST00000409531 EFCAB7A8K855 629 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 C9orf172C9J069 976 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 FOXE1O00358 373 aaPredicted RBP15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 MANBAO00462 879 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 EDF1O60869 148 aaKnown RBP15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 CLEC3AO75596 197 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 SLC35G6P0C7Q6 338 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 SPTBP11277 2137 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 HSD3B1P14060 373 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 HSD3B2P26439 372 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 ITPKBP27987 946 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 FOXA1P55317 472 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 MC2RQ01718 297 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 RGS1Q08116 209 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 PWP1Q13610 501 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 MANEAQ5SRI9 462 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 ATG14Q6ZNE5 492 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 FAM47EQ6ZV65 393 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 ASPGQ86U10 573 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 BPHLQ86WA6 291 aaPredicted RBP15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 WDR75Q8IWA0 830 aaKnown RBP15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 BMPERQ8N8U9 685 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 OR8K5Q8NH50 307 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 HUS1BQ8NHY5 278 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 KCNE4Q8WWG9 221 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 SLC13A3Q8WWT9 602 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 NAF1Q96HR8 494 aaKnown RBP15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 ASPSCR1Q9BZE9 553 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 BRF2Q9HAW0 419 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 TNFRSF12AQ9NP84 129 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 FBXO8Q9NRD0 319 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 PSD3Q9NYI0 1048 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 SERTAD3Q9UJW9 196 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 PPT2Q9UMR5 302 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 DNAJC15Q9Y5T4 150 aa15.76■□□□□ 0.11
TSPAN4-208ENST00000409531 AHCTF1Q8WYP5 2266 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 SERTM1A2A2V5 107 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 URADA6NGE7 173 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 TMEM150CB9EJG8 249 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 H0YGG7 62 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 SERPINA6P08185 405 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 LSP1P33241 339 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 GABRA4P48169 554 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 RAB15P59190 212 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 ARF3P61204 181 aaPredicted RBP15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 GNGT1P63211 74 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 CSTF3Q12996 717 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 TUBB3Q13509 450 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 DDX39BQ13838 428 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 KCNAB1Q14722 419 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 DEFB110Q30KQ9 67 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 DCAF12Q5T6F0 453 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 FRMPD2BQ6IN97 320 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 C19orf48Q6RUI8 117 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 SPACA3Q8IXA5 215 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 GPR135Q8IZ08 494 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 GBP7Q8N8V2 638 aaPredicted RBP15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 ZNF473Q8WTR7 871 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 TWIST2Q8WVJ9 160 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 CMTM7Q96FZ5 175 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 CHMP6Q96FZ7 201 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 FCRL4Q96PJ5 515 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 MTERF1Q99551 399 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 CENPKQ9BS16 269 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 DDA1Q9BW61 102 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 FGF21Q9NSA1 209 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 PNPOQ9NVS9 261 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 NMRK1Q9NWW6 199 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms