RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 A8MX80 341 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 BTN3A3O00478 584 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 GRAP2O75791 330 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 SCO1O75880 301 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 MLYCDO95822 493 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 POMCP01189 267 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 DNTTP04053 509 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 PRKACGP22612 351 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 AKAP5P24588 427 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 GGT2P36268 569 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 SLC11A1P49279 550 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 EPHA4P54764 986 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 RPP38P78345 283 aaKnown RBP10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 RUNX1T1Q06455 604 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 ABRQ12979 859 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 SIM2Q14190 667 aaPredicted RBP10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 MICAQ29983 383 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 GOLGA7BQ2TAP0 167 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 ATP6AP1LQ52LC2 224 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 RUNDC3AQ59EK9 446 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 HECTD2Q5U5R9 776 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 ANKRD34AQ69YU3 496 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 BICRALQ6AI39 1079 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 MPZL3Q6UWV2 235 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 CCDC71Q8IV32 467 aaPredicted RBP10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 C1orf127Q8N9H9 656 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 DTX3Q8N9I9 347 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 FBXO30Q8TB52 745 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 AKAP1Q92667 903 aaKnown RBP eCLIP10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 GGHQ92820 318 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 HGDQ93099 445 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 FAM162AQ96A26 154 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 SGTBQ96EQ0 304 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 USB1Q9BQ65 265 aaKnown RBP10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 TCF25Q9BQ70 676 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 FZD8Q9H461 694 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 MIOSQ9NXC5 875 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 CLEC1BQ9P126 229 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 KIF17Q9P2E2 1029 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 CACNG4Q9UBN1 327 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 SEC14L4Q9UDX3 406 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 SAMD4AQ9UPU9 718 aaKnown RBP10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 V9GYQ6 96 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 TRBV5-3A0A0A0MS03 114 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 ARL5CA6NH57 179 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 WASHC1A8K0Z3 465 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 ZNF670-ZNF695F2Z2N8 137 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 TSPAN4O14817 238 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 SH3BP5O60239 455 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 KLK8O60259 260 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 MITFO75030 526 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 B3GALNT1O75752 331 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 IL1AP01583 271 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 SEMG1P04279 462 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 PIPP12273 146 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 HLA-EP13747 358 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 MTHFD2P13995 350 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 MAOBP27338 520 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 ADRA1AP35348 466 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 RECQLP46063 649 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 GZMMP51124 257 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 RAB14P61106 215 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 POLR2GP62487 172 aaKnown RBP eCLIP10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 ZNF267Q14586 743 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 SMN1Q16637 294 aaKnown RBP10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 INO80DQ53TQ3 878 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 C6orf136Q5SQH8 315 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 GPR158Q5T848 1215 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 PTCRAQ6ISU1 281 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 RETSATQ6NUM9 610 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 ZNF549Q6P9A3 640 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 TMEM107Q6UX40 140 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 RRM2BQ7LG56 351 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 ZZZ3Q8IYH5 903 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 SPATA6LQ8N4H0 392 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 EFHBQ8N7U6 833 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 LPCAT1Q8NF37 534 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 WDR48Q8TAF3 677 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 FANK1Q8TC84 345 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 UBASH3BQ8TF42 649 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 AUTS2Q8WXX7 1259 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 ST8SIA4Q92187 359 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 CREB3L1Q96BA8 519 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 COQ8BQ96D53 544 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 QRFPRQ96P65 431 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 TBL1YQ9BQ87 522 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 CHCHD6Q9BRQ6 235 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 MED18Q9BUE0 208 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 TRIM8Q9BZR9 551 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 CCSER2Q9H7U1 834 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 ARNT2Q9HBZ2 717 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 ABCB8Q9NUT2 735 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 SPG21Q9NZD8 308 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 ZNF224Q9NZL3 707 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 KLK14Q9P0G3 267 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 SH3BP4Q9P0V3 963 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 UBQLN2Q9UHD9 624 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 PCDHGA6Q9Y5G7 932 aa10.26□□□□□ -0.77
NIF3L1-204ENST00000409357 LOC100506127A0A0U1RQW1 187 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms