RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 COLGALT2Q8IYK4 626 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 SAMD11Q96NU1 681 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 MGME1Q9BQP7 344 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 TRIT1Q9H3H1 467 aaKnown RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 NEK6Q9HC98 313 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 HCFC1R1Q9NWW0 138 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 NUFIP1Q9UHK0 495 aaKnown RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 ZNF840PA6NDX5 716 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 ANTXRLA6NF34 631 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 CPSF4LA6NMK7 179 aaKnown RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 TEX46H3BTG2 121 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 M0QZQ0 153 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 ZNF197O14709 1029 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 ADAMDEC1O15204 470 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 LZTS3O60299 673 aaPredicted RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 UGT2B11O75310 529 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 CDRT1O95170 752 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 TSPAN19P0C672 248 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 PIM1P11309 404 aaPredicted RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 ZNF24P17028 368 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 DNAJA1P31689 397 aaKnown RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 SOX6P35712 828 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 HTRA3P83110 453 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 LMAN2Q12907 356 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 BTG3Q14201 252 aaPredicted RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 C5orf22Q49AR2 442 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 XKR7Q5GH72 579 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 TJAP1Q5JTD0 557 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 ZNF362Q5T0B9 420 aaPredicted RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 PDZK1Q5T2W1 519 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 BRAT1Q6PJG6 821 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 LRRC49Q8IUZ0 686 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 RIMKLAQ8IXN7 391 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 TIGD4Q8IY51 512 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 UHRF1Q96T88 793 aaPredicted RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 GAL3ST1Q99999 423 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 ITPAQ9BY32 194 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 POLR2J2Q9GZM3 115 aaKnown RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 HDHD2Q9H0R4 259 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 SLC32A1Q9H598 525 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 BRCA1P38398 1863 aaKnown RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 GLTPD2A6NH11 291 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 H0YAE9 185 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 TLX2O43763 284 aaPredicted RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 GADD45GO95257 159 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 SLC16A8O95907 504 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 CNR2P34972 360 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 FCGRTP55899 365 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 LSM11P83369 360 aaKnown RBP eCLIP8.03□□□□□ -1.127e-19■■■■■ 81
SNX13-201ENST00000409076 PPP2R2BQ00005 443 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 TARDBPQ13148 414 aaKnown RBP eCLIP8.03□□□□□ -1.127e-7■■■■□ 23
SNX13-201ENST00000409076 GAB1Q13480 694 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 SLBPQ14493 270 aaKnown RBP eCLIP8.03□□□□□ -1.12
SNX13-201ENST00000409076 MAD2L1BPQ15013 274 aaPredicted RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 ZFP69Q49AA0 526 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 ARSIQ5FYB1 569 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 RAET1GQ6H3X3 334 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 C22orf42Q6IC83 251 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 KIAA1161Q6NSJ0 714 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 SYCE2Q6PIF2 218 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 BEND5Q7L4P6 421 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 ARMCX6Q7L4S7 300 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 SNX20Q7Z614 316 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 NRARPQ7Z6K4 114 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 LHFPL3Q86UP9 236 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 WDR48Q8TAF3 677 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 BBS10Q8TAM1 723 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 CHPT1Q8WUD6 406 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 MUL1Q969V5 352 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 OR2AG1Q9H205 316 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 TMEFF2Q9UIK5 374 aaPredicted RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 TMCC3Q9ULS5 477 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 WDR37Q9Y2I8 494 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 MYL12BO14950 172 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 INPPL1O15357 1258 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 YY2O15391 372 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 ACLYP53396 1101 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 CTSCP53634 463 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 KCNC4Q03721 635 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 SLC14A2Q15849 920 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 CASP12Q6UXS9 341 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 NXPE1Q8N323 547 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 UXS1Q8NBZ7 420 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 OR5D16Q8NGK9 328 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 CD99L2Q8TCZ2 262 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 GPR151Q8TDV0 419 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 LINC01599Q8WXQ3 324 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 MRPS31Q92665 395 aaKnown RBP8.02□□□□□ -1.13
SNX13-201ENST00000409076 C1orf74Q96LT6 269 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 RDH12Q96NR8 316 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 TMED9Q9BVK6 235 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 ABCG4Q9H172 646 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 RNF186Q9NXI6 227 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 STOX2Q9P2F5 926 aaPredicted RBP8.02□□□□□ -1.13
SNX13-201ENST00000409076 VPS29Q9UBQ0 182 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 RPS6KA6Q9UK32 745 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 ASF1AQ9Y294 204 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 WBP11Q9Y2W2 641 aaKnown RBP8.02□□□□□ -1.13
SNX13-201ENST00000409076 GPSM3Q9Y4H4 160 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 SNX11Q9Y5W9 270 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 282.8 ms