RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PILRBQ9UKJ0 227 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 GRID1Q9ULK0 1009 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 IGHV4-4A0A075B6R2 117 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 A0A1W2PR80 420 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 MAGEB16A2A368 324 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 ZNF732B4DXR9 585 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 TEX28O15482 410 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 SAP30O75446 220 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 RAD51DO75771 328 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 CLDN1O95832 211 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 AMBPP02760 352 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 RAF1P04049 648 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 CHRNGP07510 517 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 NUDT17P0C025 328 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 B4GALT1P15291 398 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 RPL35AP18077 110 aaKnown RBP3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 HLA-DPA1P20036 260 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 CDKN1AP38936 164 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 SOX3P41225 446 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 GLIPR1P48060 266 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 LEPRP48357 1165 aaKnown RBP3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 OR1D5P58170 312 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 DCDC1P59894 354 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 CSNK2BP67870 215 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 GALK2Q01415 458 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 TEFQ10587 303 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 CDH18Q13634 790 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 MAPK11Q15759 364 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 ACKR1Q16570 336 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 DUSP5Q16690 384 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 C2orf76Q3KRA6 126 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 LRRC37A5PQ49AS3 106 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 ARMCX4Q5H9R4 360 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 ZNF790Q6PG37 636 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 LEKR1Q6ZMV7 388 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 Q6ZSR9 355 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 C18orf65Q6ZTR6 163 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 TMEM126BQ8IUX1 230 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 KLHDC8BQ8IXV7 354 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 DYRK2Q92630 601 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 ATP6V0A1Q93050 837 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 AZIN2Q96A70 460 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 C5orf30Q96GV9 206 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 FAM218AQ96MZ4 157 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 ATP6V0BQ99437 205 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 FAM49AQ9H0Q0 323 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 MTIF3Q9H2K0 278 aaKnown RBP3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 FAM212BQ9NTI7 297 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 PANK4Q9NVE7 773 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 PRDM4Q9UKN5 801 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 PLCL2Q9UPR0 1127 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 PYGO1Q9Y3Y4 419 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 KNSTRNQ9Y448 316 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 TEX264Q9Y6I9 313 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 PFASO15067 1338 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 IL16Q14005 1332 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 RPGRIP1LQ68CZ1 1315 aa3.42□□□□□ -1.86
HMGB1P17-201ENST00000403495 HHLA1C9JL84 531 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 PRSS44E7EML9 344 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 KLF11O14901 512 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 MAGEB2O15479 319 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 B4GAT1O43505 415 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 LRCH4O75427 683 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 BAG2O95816 211 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 PNPP00491 289 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 YES1P07947 543 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 CPA3P15088 417 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 GNB3P16520 340 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 UGT1A6P19224 532 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 RGS19P49795 217 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 ARHGAP1Q07960 439 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 HNRNPA0Q13151 305 aaKnown RBP3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 TRA2AQ13595 282 aaKnown RBP eCLIP3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 PTPN14Q15678 1187 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 CDC37Q16543 378 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 ZNF789Q5FWF6 425 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 AGAP6Q5VW22 663 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 RAB12Q6IQ22 244 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 PWWP2BQ6NUJ5 590 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 TOM1L2Q6ZVM7 507 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 FCRLAQ7L513 359 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 PRSS42Q7Z5A4 293 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 HOGA1Q86XE5 327 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 GPC2Q8N158 579 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 THEM5Q8N1Q8 247 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 PRSS35Q8N3Z0 413 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 NIPA2Q8N8Q9 360 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 SEPT8Q92599 483 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 TMEM237Q96Q45 408 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 DDX50Q9BQ39 737 aaKnown RBP3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 MTMR12Q9C0I1 747 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 NYXQ9GZU5 481 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 GPR173Q9NS66 373 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 POLKQ9UBT6 870 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 IL36AQ9UHA7 158 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 MAN1B1Q9UKM7 699 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 EXOC6BQ9Y2D4 811 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 ZNF510Q9Y2H8 683 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 WDR37Q9Y2I8 494 aa3.41□□□□□ -1.86
HMGB1P17-201ENST00000403495 MRPS28Q9Y2Q9 187 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms