RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 ASPGQ86U10 573 aa13.66□□□□□ -0.22
VAMP1-203ENST00000400911 CD163Q86VB7 1156 aa13.66□□□□□ -0.22
VAMP1-203ENST00000400911 SLC26A11Q86WA9 606 aa13.66□□□□□ -0.22
VAMP1-203ENST00000400911 SLC13A3Q8WWT9 602 aa13.66□□□□□ -0.22
VAMP1-203ENST00000400911 CCDC177Q9NQR7 707 aaPredicted RBP13.66□□□□□ -0.22
VAMP1-203ENST00000400911 NPDC1Q9NQX5 325 aaPredicted RBP13.66□□□□□ -0.22
VAMP1-203ENST00000400911 TNFRSF10DQ9UBN6 386 aa13.66□□□□□ -0.22
VAMP1-203ENST00000400911 SOX13Q9UN79 622 aa13.66□□□□□ -0.22
VAMP1-203ENST00000400911 SH2B3Q9UQQ2 575 aa13.66□□□□□ -0.22
VAMP1-203ENST00000400911 MED16Q9Y2X0 877 aa13.66□□□□□ -0.22
VAMP1-203ENST00000400911 ITPR3Q14573 2671 aa13.66□□□□□ -0.22
VAMP1-203ENST00000400911 DNHD1Q96M86 4753 aa13.66□□□□□ -0.22
VAMP1-203ENST00000400911 TCRBV7S3A2A0A539 114 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 NKX2-6A6NCS4 301 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 TPOP07202 933 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 FHP07954 510 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 MPC1LP0DKB6 136 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 OGNP20774 298 aaKnown RBP13.65□□□□□ -0.22
VAMP1-203ENST00000400911 IL10P22301 178 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 ITGA8P53708 1063 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 TFF3Q07654 80 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 CAPN13Q6MZZ7 669 aaPredicted RBP13.65□□□□□ -0.22
VAMP1-203ENST00000400911 UBE2R2Q712K3 238 aaPredicted RBP13.65□□□□□ -0.22
VAMP1-203ENST00000400911 CYP4X1Q8N118 509 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 LILRB4Q8NHJ6 448 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 FAM57AQ8TBR7 257 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 OR1F2PQ96R84 312 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 TRIM45Q9H8W5 580 aaPredicted RBP13.65□□□□□ -0.22
VAMP1-203ENST00000400911 INTS10Q9NVR2 710 aaKnown RBP13.65□□□□□ -0.22
VAMP1-203ENST00000400911 KLHL42Q9P2K6 505 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 VPS9D1Q9Y2B5 631 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 SLC22A7Q9Y694 548 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 CAPN6Q9Y6Q1 641 aa13.65□□□□□ -0.22
VAMP1-203ENST00000400911 CPAMD8Q8IZJ3 1885 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 ZNF469Q96JG9 3925 aaPredicted RBP13.64□□□□□ -0.23
VAMP1-203ENST00000400911 CTAGE9A4FU28 777 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 FAM90A27PA6NNH2 459 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 CDK2AP1O14519 115 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 TFECO14948 347 aaPredicted RBP13.64□□□□□ -0.23
VAMP1-203ENST00000400911 CDC40O60508 579 aaKnown RBP eCLIP13.64□□□□□ -0.23
VAMP1-203ENST00000400911 B4GALT2O60909 372 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 AVILO75366 819 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 PDE9AO76083 593 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 MEOX1P50221 254 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 HLCSP50747 726 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 TERF1P54274 439 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 MLF1P58340 268 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 TBPL1P62380 186 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 MPP1Q00013 466 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 KIAA0930Q6ICG6 404 aaPredicted RBP13.64□□□□□ -0.23
VAMP1-203ENST00000400911 TMEM211Q6ICI0 200 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 ZNF549Q6P9A3 640 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 PIWIL4Q7Z3Z4 852 aaKnown RBP13.64□□□□□ -0.23
VAMP1-203ENST00000400911 SULF2Q8IWU5 870 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 POGLUT1Q8NBL1 392 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 TMEM125Q96AQ2 219 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 TBC1D20Q96BZ9 403 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 DESI2Q9BSY9 194 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 PCBD2Q9H0N5 130 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 RNF6Q9Y252 685 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 DHRS7Q9Y394 339 aa13.64□□□□□ -0.23
VAMP1-203ENST00000400911 FOXO6A8MYZ6 492 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 CHST10O43529 356 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 HS6ST1O60243 411 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 PRMT3O60678 531 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 TOXO94900 526 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 B3GALT4O96024 378 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 ENO3P13929 434 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-203ENST00000400911 PAMP19021 973 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 PTMSP20962 102 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 CHRNB4P30926 498 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 TRHRP34981 398 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-203ENST00000400911 OLR1P78380 273 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 CTBP1Q13363 440 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 HERC3Q15034 1050 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 SIX1Q15475 284 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-203ENST00000400911 CCNG2Q16589 344 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 SKOR2Q2VWA4 1001 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-203ENST00000400911 CMPK2Q5EBM0 449 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 ZNF470Q6ECI4 717 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 C4orf22Q6V702 233 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 GSTA5Q7RTV2 222 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 C17orf64Q86WR6 236 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 CCDC71Q8IV32 467 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-203ENST00000400911 DENND6AQ8IWF6 608 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 DMRTC2Q8IXT2 367 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-203ENST00000400911 CPNE9Q8IYJ1 553 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 RPRMLQ8N4K4 120 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 AFAP1L2Q8N4X5 818 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 MFSD9Q8NBP5 474 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 ZNF740Q8NDX6 193 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 ASB5Q8WWX0 329 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 NRGNQ92686 78 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 RND1Q92730 232 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 KCNJ9Q92806 393 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 ALKBH8Q96BT7 664 aaKnown RBP13.63□□□□□ -0.23
VAMP1-203ENST00000400911 GPR21Q99679 349 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 ZNF559Q9BR84 538 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 TSGA10Q9BZW7 698 aa13.63□□□□□ -0.23
VAMP1-203ENST00000400911 KCNJ16Q9NPI9 418 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms