RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 OR4N5Q8IXE1 308 aa13.34□□□□□ -0.27
VAPA-202ENST00000400000 DCBLD2Q96PD2 775 aa13.34□□□□□ -0.27
VAPA-202ENST00000400000 KIAA1210Q9ULL0 1709 aa13.34□□□□□ -0.27
VAPA-202ENST00000400000 A6NLC8 198 aa13.33□□□□□ -0.27
VAPA-202ENST00000400000 RLN2P04090 185 aa13.33□□□□□ -0.27
VAPA-202ENST00000400000 GABRA3P34903 492 aa13.33□□□□□ -0.27
VAPA-202ENST00000400000 MAD2L1BPQ15013 274 aaPredicted RBP13.33□□□□□ -0.27
VAPA-202ENST00000400000 CDKL4Q5MAI5 379 aa13.33□□□□□ -0.27
VAPA-202ENST00000400000 OR5T1Q8NG75 326 aa13.33□□□□□ -0.27
VAPA-202ENST00000400000 XPNPEP1Q9NQW7 623 aa13.33□□□□□ -0.27
VAPA-202ENST00000400000 FLRT1Q9NZU1 646 aa13.33□□□□□ -0.27
VAPA-202ENST00000400000 INSL5Q9Y5Q6 135 aa13.33□□□□□ -0.27
VAPA-202ENST00000400000 TRAV6A0A075B6T7 132 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 CIB4A0PJX0 185 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 PTGIRP43119 386 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 ARRB1P49407 418 aaPredicted RBP13.33□□□□□ -0.28
VAPA-202ENST00000400000 ZNF227Q86WZ6 799 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 OR6N2Q8NGY6 317 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 SLC22A18Q96BI1 424 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 ASPNQ9BXN1 380 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 SLC32A1Q9H598 525 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 SPATA7Q9P0W8 599 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 GPR34Q9UPC5 381 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 PCDHB14Q9Y5E9 798 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 TEX13DA0A0J9YY54 714 aaPredicted RBP13.33□□□□□ -0.28
VAPA-202ENST00000400000 ZNF99A8MXY4 864 aaPredicted RBP13.33□□□□□ -0.28
VAPA-202ENST00000400000 H3BQ06 376 aaPredicted RBP13.33□□□□□ -0.28
VAPA-202ENST00000400000 LEFTY1O75610 366 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 FASLGP48023 281 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 NPTX1Q15818 432 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 RAET1LQ5VY80 246 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 GPALPP1Q8IXQ4 340 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 PRR18Q8N4B5 295 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 ZSCAN4Q8NAM6 433 aaPredicted RBP13.33□□□□□ -0.28
VAPA-202ENST00000400000 CMTM7Q96FZ5 175 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 WACQ9BTA9 647 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 CXorf21Q9HAI6 301 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 FKBP14Q9NWM8 211 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 MRPL15Q9P015 296 aaKnown RBP13.33□□□□□ -0.28
VAPA-202ENST00000400000 OAZ3Q9UMX2 235 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 HCRTR2O43614 444 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 LRRC69Q6ZNQ3 347 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 GALNT15Q8N3T1 639 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 ZNF283Q8N7M2 679 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 OR2AP1Q8NGE2 309 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 LRRC58Q96CX6 371 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 IL17FQ96PD4 163 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 CADM1Q9BY67 442 aaKnown RBP13.33□□□□□ -0.28
VAPA-202ENST00000400000 OR51I1Q9H343 314 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 TAS2R7Q9NYW3 318 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 CXXC1Q9P0U4 656 aaPredicted RBP13.33□□□□□ -0.28
VAPA-202ENST00000400000 REV1Q9UBZ9 1251 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 C14orf80Q86SX3 495 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 CCDC36Q8IYA8 594 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 HAPLN3Q96S86 360 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 BAIAP2Q9UQB8 552 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 HIF3AQ9Y2N7 669 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 OR1A2Q9Y585 309 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 SLC2A2P11168 524 aaPredicted RBP13.33□□□□□ -0.28
VAPA-202ENST00000400000 G6PDP11413 515 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 FRG2Q64ET8 278 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 ZNF554Q86TJ5 538 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 SCAMP4Q969E2 229 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 ALPK1Q96QP1 1244 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 FRG2BQ96QU4 278 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 CCNL2Q96S94 520 aaPredicted RBP13.33□□□□□ -0.28
VAPA-202ENST00000400000 CMKLR1Q99788 373 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 Q9N2J8 555 aa13.33□□□□□ -0.28
VAPA-202ENST00000400000 FBXO9Q9UK97 447 aaPredicted RBP13.33□□□□□ -0.28
VAPA-202ENST00000400000 NOP16Q9Y3C1 178 aaKnown RBP13.33□□□□□ -0.28
VAPA-202ENST00000400000 GRID2O43424 1007 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 GSTT2BP0CG30 244 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 CHRM1P11229 460 aaPredicted RBP13.32□□□□□ -0.28
VAPA-202ENST00000400000 CD72P21854 359 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 CD40LGP29965 261 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 KLHL22Q53GT1 634 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 CNTD1Q8N815 330 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 INO80EQ8NBZ0 244 aaPredicted RBP13.32□□□□□ -0.28
VAPA-202ENST00000400000 ZNF701Q9NV72 531 aaPredicted RBP13.32□□□□□ -0.28
VAPA-202ENST00000400000 NPIPA2E9PIF3 369 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 NPIPA3F8WFD2 350 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 ITGA10O75578 1167 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 CDRT1O95170 752 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 RHOP08100 348 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 OR12D1P0DN82 309 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 RAP2AP10114 183 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 MS4A13Q5J8X5 152 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 SHISA6Q6ZSJ9 500 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 TICAM1Q8IUC6 712 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 OR5K1Q8NHB7 308 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 WFIKKN2Q8TEU8 576 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 SYNGR4O95473 234 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 H1F0P07305 194 aaKnown RBP13.32□□□□□ -0.28
VAPA-202ENST00000400000 MAGEA2P43356 314 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 DEFB110Q30KQ9 67 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 PTCHD3Q3KNS1 767 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 DGCR14Q96DF8 476 aaKnown RBP13.32□□□□□ -0.28
VAPA-202ENST00000400000 NOCTQ9UK39 431 aaKnown RBP13.32□□□□□ -0.28
VAPA-202ENST00000400000 TACSTD2P09758 323 aa13.32□□□□□ -0.28
VAPA-202ENST00000400000 GNRHRP30968 328 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms