RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ERP29P30040 261 aaKnown RBP16.48■□□□□ 0.23
PTPRA-205ENST00000399903 ZNF79Q15937 498 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 SKA2Q8WVK7 121 aaPredicted RBP16.48■□□□□ 0.23
PTPRA-205ENST00000399903 DACT3Q96B18 629 aaPredicted RBP16.48■□□□□ 0.23
PTPRA-205ENST00000399903 ZC4H2Q9NQZ6 224 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 MCUBQ9NWR8 336 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 SRRDQ9UH36 339 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 A0A0B4J293 547 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 FAM220BPB1ANY3 271 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 TNFRSF11BO00300 401 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 UGT2B17O75795 530 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 CLEC2LP0C7M8 214 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 C19orf57Q0VDD7 668 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 FLYWCH1Q4VC44 716 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 LRRC66Q68CR7 880 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 ZNF551Q7Z340 670 aaPredicted RBP16.48■□□□□ 0.23
PTPRA-205ENST00000399903 GPR65Q8IYL9 337 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 VWA5B2Q8N398 1253 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 RNF31Q96EP0 1072 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 TMEM184CQ9NVA4 438 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 EVA1BQ9NVM1 165 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 HCN4Q9Y3Q4 1203 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 NINQ8N4C6 2090 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 H3BUI4 141 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 PLK4O00444 970 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 MUSKO15146 869 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 C9P02748 559 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 NUDT7P0C024 238 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 MC4RP32245 332 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 KDELR2P33947 212 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 KIR2DL3P43628 341 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 CDH18Q13634 790 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 ARHGEF7Q14155 803 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 KIAA0040Q15053 153 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 TIMM50Q3ZCQ8 353 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 MS4A13Q5J8X5 152 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 ATG9BQ674R7 924 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 C19orf18Q8NEA5 215 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 OR9Q1Q8NGQ5 310 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 ZFAND1Q8TCF1 268 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 CPPED1Q9BRF8 314 aaPredicted RBP16.47■□□□□ 0.23
PTPRA-205ENST00000399903 BARHL1Q9BZE3 327 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 NXF2Q9GZY0 626 aaKnown RBP16.47■□□□□ 0.23
PTPRA-205ENST00000399903 LATS2Q9NRM7 1088 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 FAM240BA0A1B0GVZ2 78 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 PLD2O14939 933 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 MLLT6P55198 1093 aaPredicted RBP16.47■□□□□ 0.23
PTPRA-205ENST00000399903 CAV3P56539 151 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 OLR1P78380 273 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 SPIBQ01892 262 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 ZNF33AQ06730 810 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 UAP1L1Q3KQV9 507 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 ESCO2Q56NI9 601 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 FBXL22Q6P050 247 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 LPCAT1Q8NF37 534 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 NLGN4YQ8NFZ3 816 aaPredicted RBP16.47■□□□□ 0.23
PTPRA-205ENST00000399903 OR4M1Q8NGD0 313 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 OR9Q2Q8NGE9 314 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 BRSK1Q8TDC3 778 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 APOLD1Q96LR9 279 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 GPBP1L1Q9HC44 474 aaPredicted RBP16.47■□□□□ 0.23
PTPRA-205ENST00000399903 COMMD3Q9UBI1 195 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 A3GALT2U3KPV4 340 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 LOC730098B7Z3J9 87 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 CLIC1O00299 241 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 IFRD1O00458 451 aaPredicted RBP16.47■□□□□ 0.23
PTPRA-205ENST00000399903 ESR1P03372 595 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 ZNF250P15622 560 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 SLC11A1P49279 550 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 RPS14P62263 151 aaKnown RBP16.47■□□□□ 0.23
PTPRA-205ENST00000399903 DSC1Q08554 894 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 HYAL2Q12891 473 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 HNRNPA0Q13151 305 aaKnown RBP16.47■□□□□ 0.23
PTPRA-205ENST00000399903 DDX39BQ13838 428 aaKnown RBP16.47■□□□□ 0.23
PTPRA-205ENST00000399903 C16orf62Q7Z3J2 963 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 CAPNS2Q96L46 248 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 TTLL2Q9BWV7 592 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 MARCH2Q9P0N8 246 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 ERVW-1Q9UQF0 538 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 ALG5Q9Y673 324 aa16.47■□□□□ 0.23
PTPRA-205ENST00000399903 KIAA0100Q14667 2235 aaKnown RBP16.46■□□□□ 0.23
PTPRA-205ENST00000399903 PLOD3O60568 738 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 RORCP51449 518 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 ABHD18Q0P651 414 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 POU4F3Q15319 338 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 TRIQKQ629K1 86 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 PLEKHM3Q6ZWE6 761 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 KRT73Q86Y46 540 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 RNF175Q8N4F7 328 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 GALNT6Q8NCL4 622 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 PPIL3Q9H2H8 161 aaKnown RBP16.46■□□□□ 0.23
PTPRA-205ENST00000399903 ING3Q9NXR8 418 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 A0A1W2PQL4 384 aaPredicted RBP16.46■□□□□ 0.23
PTPRA-205ENST00000399903 LEUTXA8MZ59 168 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 CYP17A1P05093 508 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 IRF1P10914 325 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 GPC1P35052 558 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 FEN1P39748 380 aaKnown RBP16.46■□□□□ 0.23
PTPRA-205ENST00000399903 MLLT3P42568 568 aaPredicted RBP16.46■□□□□ 0.23
PTPRA-205ENST00000399903 OR10G2Q8NGC3 310 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms