RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 LCHNA4D1U4 455 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ARHGAP33O14559 1287 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 CTPS1P17812 591 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ALAS2P22557 587 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 EPHA2P29317 976 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 CAPZA2P47755 286 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 PRKAG1P54619 331 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ERVK-25P63136 954 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 PCDH1Q08174 1060 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 XKR6Q5GH73 641 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 MFSD14CQ5VZR4 134 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ZNF598Q86UK7 904 aaKnown RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 RNF130Q86XS8 419 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 SAMD12Q8N8I0 201 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 TEX47Q8TBZ9 253 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 KAT2AQ92830 837 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 PEX13Q92968 403 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 NXPE2Q96DL1 559 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ZC3H10Q96K80 434 aaKnown RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 SERPINB11Q96P15 392 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 MTERF1Q99551 399 aaKnown RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ARL6Q9H0F7 186 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 MAGIXQ9H6Y5 334 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ATP13A1Q9HD20 1204 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 COMMD9Q9P000 198 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 NINQ8N4C6 2090 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 TEX13CA0A0J9YWL9 993 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 TCRBV5S2A0A599 114 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 LOC730098B7Z3J9 87 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 C19orf81C9J6K1 198 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 J3KR12 359 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ECDO95905 644 aaPredicted RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 C1QBP02746 253 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 RETP07949 1114 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 PRSS56P0CW18 603 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 PRPS2P11908 318 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 EXOC3L2Q2M3D2 409 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 CARD16Q5EG05 197 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ESX1Q8N693 406 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 NEIL3Q8TAT5 605 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 HCAR2Q8TDS4 363 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 TMEM174Q8WUU8 243 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 KCNN1Q92952 543 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ISL2Q96A47 359 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 CDCA5Q96FF9 252 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 NELL2Q99435 816 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 SEPT5Q99719 369 aaPredicted RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 SEMA3GQ9NS98 782 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ABCC13Q9NSE7 274 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ZMAT5Q9UDW3 170 aaKnown RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 DISC1C4P0D8 188 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 NME6O75414 186 aaPredicted RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 PAHP00439 452 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 PRG2P13727 222 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 PPIBP23284 216 aaKnown RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 SCNN1GP51170 649 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ERVPABLB-1P60509 514 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 RGS1Q08116 209 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ZNF177Q13360 481 aaPredicted RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 FCN2Q15485 313 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 IGSF11Q5DX21 431 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 SDHAF4Q5VUM1 108 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 IRAK1BP1Q5VVH5 260 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 KIAA1161Q6NSJ0 714 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 METTL2BQ6P1Q9 378 aaKnown RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 LRRN1Q6UXK5 716 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 WASH2PQ6VEQ5 465 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ADCK2Q7Z695 626 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 RGL4Q8IZJ4 473 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 OXR1Q8N573 874 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ZNF655Q8N720 491 aaPredicted RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 FAM46DQ8NEK8 389 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 NPLOC4Q8TAT6 608 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 RBPMSQ93062 196 aaKnown RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ELMOD3Q96FG2 381 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 METTL2AQ96IZ6 378 aaKnown RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 MRGPRX2Q96LB1 330 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 TEFMQ96QE5 360 aaKnown RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 TBX5Q99593 518 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 TSNAXQ99598 290 aaKnown RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 TSSK6Q9BXA6 273 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 CACNG6Q9BXT2 260 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 DERL2Q9GZP9 239 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 ELAC1Q9H777 363 aaKnown RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 GPN1Q9HCN4 374 aaPredicted RBP9.01□□□□□ -0.97
COL28A1-201ENST00000399429 SLC23A1Q9UHI7 598 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 MGAT4BQ9UQ53 548 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 PCDHGC4Q9Y5F7 938 aa9.01□□□□□ -0.97
COL28A1-201ENST00000399429 MYBPHLA2RUH7 354 aa9□□□□□ -0.97
COL28A1-201ENST00000399429 FAM25EA8MYX2 175 aa9□□□□□ -0.97
COL28A1-201ENST00000399429 B4DXG7 233 aa9□□□□□ -0.97
COL28A1-201ENST00000399429 ERVH48-1M5A8F1 160 aa9□□□□□ -0.97
COL28A1-201ENST00000399429 GMDSO60547 372 aa9□□□□□ -0.97
COL28A1-201ENST00000399429 PAPSS2O95340 614 aaPredicted RBP9□□□□□ -0.97
COL28A1-201ENST00000399429 PEPDP12955 493 aa9□□□□□ -0.97
COL28A1-201ENST00000399429 PTPRAP18433 802 aa9□□□□□ -0.97
COL28A1-201ENST00000399429 CNR2P34972 360 aa9□□□□□ -0.97
COL28A1-201ENST00000399429 RPS19P39019 145 aaKnown RBP9□□□□□ -0.97
COL28A1-201ENST00000399429 TGM4P49221 684 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms