RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 NLGN3Q9NZ94 848 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 LGALS13Q9UHV8 139 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 DNMT3AQ9Y6K1 912 aaPredicted RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 F5H0A9 414 aaPredicted RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 J3QRK9 145 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 SOX1O00570 391 aaPredicted RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 GABBR2O75899 941 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 NR0B1P51843 470 aaKnown RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 RHDQ02161 417 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 NIPAL4Q0D2K0 466 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 ELOAQ14241 798 aaKnown RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 GPR139Q6DWJ6 353 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 OR4F3Q6IEY1 312 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 AVL9Q8NBF6 648 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 NLGN2Q8NFZ4 835 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 OR56A1Q8NGH5 318 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 NR4A3Q92570 626 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 PADI3Q9ULW8 664 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 BACE2Q9Y5Z0 518 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 C1orf167Q5SNV9 1468 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 HAS3O00219 553 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 JUNP05412 331 aaKnown RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 ACADVLP49748 655 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 RAB5BP61020 215 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 FAPQ12884 760 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 PTGR1Q14914 329 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 CCDC58Q4VC31 144 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 KIAA0930Q6ICG6 404 aaPredicted RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 RGMBQ6NW40 437 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 CEACAM20Q6UY09 585 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 TMPPEQ6ZT21 453 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 LHFPL3Q86UP9 236 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 PACRGLQ8N7B6 248 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 HMGB4Q8WW32 186 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 TMEM185BQ9H7F4 350 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 EXOSC1Q9Y3B2 195 aaKnown RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 RHBDL3P58872 404 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 TAS2R39P59534 338 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 CDK6Q00534 326 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 GPR157Q5UAW9 335 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 NPAS4Q8IUM7 802 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 GNPDA2Q8TDQ7 276 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 CCM2Q9BSQ5 444 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 SLC32A1Q9H598 525 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 CD93Q9NPY3 652 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 IMPDH1P20839 514 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 CSKP41240 450 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 NOGQ13253 232 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 GRIK5Q16478 980 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 BCL2A1Q16548 175 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 ZNF773Q6PK81 442 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 C1orf52Q8N6N3 182 aaKnown RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 FAM46DQ8NEK8 389 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 HDAC2Q92769 488 aaKnown RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 ZNF358Q9NW07 568 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 FBXW11Q9UKB1 542 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 WDR37Q9Y2I8 494 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 PCDHGA8Q9Y5G5 932 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 TECPR2O15040 1411 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 MBD5Q9P267 1494 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 B4GALT2O60909 372 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 COL28A1Q2UY09 1125 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 GPR33Q49SQ1 333 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 GDPD4Q6W3E5 623 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 ILDR1Q86SU0 546 aaPredicted RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 C2orf15Q8WU43 125 aaKnown RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 PEX13Q92968 403 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 PCED1BQ96HM7 432 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 ATG5Q9H1Y0 275 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 DLGAP1O14490 977 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 S1PR1P21453 382 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 HMGCS1Q01581 520 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 RIPPLY1Q0D2K3 151 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 SLC39A4Q6P5W5 647 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 LRRTM4Q86VH4 590 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 ARL14Q8N4G2 192 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 PYCR2Q96C36 320 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 HERC2P3Q9BVR0 1158 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 SEC14L4Q9UDX3 406 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 C4BPAP04003 597 aaKnown RBP11.28□□□□□ -0.6
HLCS-202ENST00000399120 CD48P09326 243 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 ZNF84P51523 738 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 HSD11B2P80365 405 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 ARHGAP12Q8IWW6 846 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 OR5T1Q8NG75 326 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 OR6N2Q8NGY6 317 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 FANK1Q8TC84 345 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 PYURFQ96I23 114 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 SYT4Q9H2B2 425 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 GNG13Q9P2W3 67 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 ICKQ9UPZ9 632 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 RAB4AP20338 218 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 RPL10P27635 214 aaKnown RBP11.28□□□□□ -0.6
HLCS-202ENST00000399120 FOXK1P85037 733 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 SEMG2Q02383 582 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 GHRHRQ02643 423 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 OR8K3Q8NH51 312 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 IL31RAQ8NI17 732 aa11.28□□□□□ -0.6
HLCS-202ENST00000399120 ASB9Q96DX5 294 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms