RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 WDR34Q96EX3 536 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 PTCD3Q96EY7 689 aaKnown RBP24.23■■□□□ 1.47
U2AF1-203ENST00000398137 ZNF285Q96NJ3 590 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 NOL11Q9H8H0 719 aaKnown RBP24.23■■□□□ 1.47
U2AF1-203ENST00000398137 ZBTB26Q9HCK0 441 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 OXSMQ9NWU1 459 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 P2RX6O15547 441 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 PRPF4O43172 522 aaKnown RBP eCLIP24.22■■□□□ 1.47
U2AF1-203ENST00000398137 SUPT7LO94864 414 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 CCNYL3P0C7X3 344 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 CDH13P55290 713 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 MPP2Q14168 576 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 RBBP5Q15291 538 aaKnown RBP24.22■■□□□ 1.47
U2AF1-203ENST00000398137 RBBP7Q16576 425 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 TTMPQ5BVD1 217 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 TCTE1Q5JU00 501 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 LCN10Q6JVE6 187 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 VN1R4Q7Z5H5 301 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 PTRH1Q86Y79 214 aaKnown RBP24.22■■□□□ 1.47
U2AF1-203ENST00000398137 CSNK1A1LQ8N752 337 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 MFSD9Q8NBP5 474 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 APOBEC4Q8WW27 367 aaKnown RBP24.22■■□□□ 1.47
U2AF1-203ENST00000398137 THAP11Q96EK4 314 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 ATP6V1G3Q96LB4 118 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 EFCAB11Q9BUY7 163 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 MECRQ9BV79 373 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 ACTR8Q9H981 624 aa24.22■■□□□ 1.47
U2AF1-203ENST00000398137 HEMK1Q9Y5R4 338 aaPredicted RBP24.22■■□□□ 1.47
U2AF1-203ENST00000398137 KCNE1BA0A087WTH5 132 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 OR7A17O14581 309 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 TM9SF1O15321 606 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 ZNF749O43361 778 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 SRPX2O60687 465 aaPredicted RBP24.21■■□□□ 1.47
U2AF1-203ENST00000398137 CREG1O75629 220 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 ALDH3A1P30838 453 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 ETV4P43268 484 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 SCTRP47872 440 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 RPS18P62269 152 aaKnown RBP24.21■■□□□ 1.47
U2AF1-203ENST00000398137 TRAF3Q13114 568 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 TBCCQ15814 346 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 LIPMQ5VYY2 423 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.21■■□□□ 1.47
U2AF1-203ENST00000398137 KRT78Q8N1N4 520 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 ANKRD42Q8N9B4 389 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 OR52B6Q8NGF0 335 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 ATP6V1E2Q96A05 226 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 ABHD17AQ96GS6 310 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 SARGQ9BW04 601 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 ACBD3Q9H3P7 528 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 ACTL8Q9H568 366 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 KCND3Q9UK17 655 aa24.21■■□□□ 1.47
U2AF1-203ENST00000398137 MDC1Q14676 2089 aaKnown RBP24.2■■□□□ 1.47
U2AF1-203ENST00000398137 TMEM120BA0PK00 339 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 C21orf140B9A014 251 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 K7EM74 188 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 CPNE3O75131 537 aaKnown RBP24.2■■□□□ 1.46
U2AF1-203ENST00000398137 WFS1O76024 890 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 ZWINTO95229 277 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 CXCR2P25025 360 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 CASP2P42575 452 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 CCNG1P51959 295 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 NAGLUP54802 743 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 DNAJB13P59910 316 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 CLCQ05315 142 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 PCDH1Q08174 1060 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 HKDC1Q2TB90 917 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 PAGE2BQ5JRK9 111 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 TLDC1Q6P9B6 456 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 TMIGD1Q6UXZ0 262 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 ASPGQ86U10 573 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 ANKRD53Q8N9V6 530 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 TTC29Q8NA56 475 aaPredicted RBP24.2■■□□□ 1.46
U2AF1-203ENST00000398137 TRPC4APQ8TEL6 797 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 PKNOX2Q96KN3 472 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 CDK15Q96Q40 435 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 MACROD1Q9BQ69 325 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 ACTR5Q9H9F9 607 aaPredicted RBP24.2■■□□□ 1.46
U2AF1-203ENST00000398137 ZNF71Q9NQZ8 489 aaPredicted RBP24.2■■□□□ 1.46
U2AF1-203ENST00000398137 FER1L5A0AVI2 2057 aa24.2■■□□□ 1.46
U2AF1-203ENST00000398137 MYO18BQ8IUG5 2567 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 PPP6CO00743 305 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 SERPIND1P05546 499 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 RORAP35398 523 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 LAPTM5Q13571 262 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 E2F2Q14209 437 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 GRM7Q14831 915 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 PRTGQ2VWP7 1150 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 GRHL2Q6ISB3 625 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 ATG14Q6ZNE5 492 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 SLC7A5P2Q9GIP4 190 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 GSTO2Q9H4Y5 243 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 MLXIPLQ9NP71 852 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 RUVBL1Q9Y265 456 aaKnown RBP24.19■■□□□ 1.46
U2AF1-203ENST00000398137 RNF11Q9Y3C5 154 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 PCDHB3Q9Y5E6 796 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 AP1M2Q9Y6Q5 423 aa24.19■■□□□ 1.46
U2AF1-203ENST00000398137 A0A1B0GTL3 188 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 CDC14CA4D256 554 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 WISP1O95388 367 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 RECKO95980 971 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms