RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 KCNE1BA0A087WTH5 132 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 CCDC78A2IDD5 438 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 OR5K3A6NET4 321 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 E2F3O00716 465 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 RASGRF2O14827 1237 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 HNRNPRO43390 633 aaKnown RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 OIP5O43482 229 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 GPC4O75487 556 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 CDK14O94921 469 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 CLDN7O95471 211 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ABHD2P08910 425 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 NR2F1P10589 423 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 PSMB4P28070 264 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 STX2P32856 288 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 CSTF2P33240 577 aaKnown RBP eCLIP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 PHBP35232 272 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ABCG1P45844 678 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 LEPRP48357 1165 aaKnown RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 CUL1Q13616 776 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 PPA1Q15181 289 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 BAK1Q16611 211 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 PRRT3Q5FWE3 981 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ANKS6Q68DC2 871 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 BTN2A1Q7KYR7 527 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 DTX1Q86Y01 620 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 LINC00346Q8IVM7 164 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 REXO1L1PQ8IX06 675 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 GPALPP1Q8IXQ4 340 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 KBTBD2Q8IY47 623 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 BCL6BQ8N143 479 aaPredicted RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 PDIK1LQ8N165 341 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 DCLK2Q8N568 766 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 SNX33Q8WV41 574 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 KCNE4Q8WWG9 221 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ALG3Q92685 438 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 INPP5DQ92835 1189 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 RAD51AP1Q96B01 352 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 OXNAD1Q96HP4 312 aaPredicted RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 CDKN2AIPNLQ96HQ2 116 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 METTL2AQ96IZ6 378 aaKnown RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 SLC46A1Q96NT5 459 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ZIM3Q96PE6 472 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 SYT3Q9BQG1 590 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 GORASP1Q9BQQ3 440 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 WRAP53Q9BUR4 548 aaKnown RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 MECRQ9BV79 373 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 SPRY4Q9C004 299 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 SLC6A17Q9H1V8 727 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 OR10A5Q9H207 317 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 OR52A5Q9H2C5 316 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 IL26Q9NPH9 171 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 LRIT1Q9P2V4 623 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ATXN10Q9UBB4 475 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 CDC14AQ9UNH5 594 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 OTOGLQ3ZCN5 2332 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 A0A0J9YY10 115 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 FAM90A20PA6NIJ5 464 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 PATE3B3GLJ2 98 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 GAPDHSO14556 408 aaPredicted RBP3.62□□□□□ -1.83
UBE3A-202ENST00000397954 UGDHO60701 494 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 PSIP1O75475 530 aaKnown RBP3.62□□□□□ -1.83
UBE3A-202ENST00000397954 GRPP07492 148 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 GLI4P10075 376 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 EZRP15311 586 aaKnown RBP3.62□□□□□ -1.83
UBE3A-202ENST00000397954 DDX5P17844 614 aaKnown RBP3.62□□□□□ -1.83
UBE3A-202ENST00000397954 NELFEP18615 380 aaKnown RBP3.62□□□□□ -1.83
UBE3A-202ENST00000397954 CXCR2P25025 360 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 CD1CP29017 333 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 PKLRP30613 574 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 HNF4AP41235 474 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 GNPDA1P46926 289 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 PXNP49023 591 aaPredicted RBP3.62□□□□□ -1.83
UBE3A-202ENST00000397954 SERPINB9P50453 376 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 NRG3P56975 720 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 ATP6V0D1P61421 351 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 PRAMEP78395 509 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 IL13RA1P78552 427 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 HSD11B2P80365 405 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 HABP2Q14520 560 aaPredicted RBP3.62□□□□□ -1.83
UBE3A-202ENST00000397954 INSCQ1MX18 579 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 ZNF674Q2M3X9 581 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 C2CD6Q53TS8 623 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 CRB2Q5IJ48 1285 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 PLAG1Q6DJT9 500 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 GPR139Q6DWJ6 353 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 NEPROQ6NW34 567 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 CASC4Q6P4E1 433 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 ZNF517Q6ZMY9 492 aaPredicted RBP3.62□□□□□ -1.83
UBE3A-202ENST00000397954 RAB43Q86YS6 212 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 LRRC34Q8IZ02 419 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 FBXO39Q8N4B4 442 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 FRMD1Q8N878 549 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 TTC29Q8NA56 475 aaPredicted RBP3.62□□□□□ -1.83
UBE3A-202ENST00000397954 GPR26Q8NDV2 337 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 TOR1AIP2Q8NFQ8 470 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 GSDMBQ8TAX9 411 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 CPT1BQ92523 772 aa3.62□□□□□ -1.83
UBE3A-202ENST00000397954 PRR11Q96HE9 360 aaPredicted RBP3.62□□□□□ -1.83
UBE3A-202ENST00000397954 SLC45A3Q96JT2 553 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms