RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ZNF480Q8WV37 535 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 NRBF2Q96F24 287 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CTRCQ99895 268 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SAP18O00422 153 aaKnown RBP17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 EPHA2P29317 976 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 DGKGP49619 791 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 DHCR24Q15392 516 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SIX5Q8N196 739 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 POF1BQ8WVV4 589 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 FOPNLQ96NB1 174 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TM9SF3Q9HD45 589 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PDP1Q9P0J1 537 aaPredicted RBP17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 BAG5Q9UL15 447 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PRELID1Q9Y255 219 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ERGIC3Q9Y282 383 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 IRAK3Q9Y616 596 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 MGAT4DA6NG13 374 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TRIM64BA6NI03 449 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 XYLBO75191 536 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 HLA-EP13747 358 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ENDOUP21128 410 aaKnown RBP17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 FMO3P31513 532 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ARHGDIAP52565 204 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TMBIM6P55061 237 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TBPL1P62380 186 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 HTRA4P83105 476 aaPredicted RBP17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 STARD3Q14849 445 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 NDUFA5Q16718 116 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PPP2R2DQ66LE6 453 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ERAP2Q6P179 960 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 HORMAD1Q86X24 394 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SLC15A4Q8N697 577 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CNDP2Q96KP4 475 aaKnown RBP17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 FAM83CQ9BQN1 747 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 BRF2Q9HAW0 419 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TMEM9Q9P0T7 183 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 NFKBIL1Q9UBC1 381 aaPredicted RBP17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 RPS6KA6Q9UK32 745 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SAMHD1Q9Y3Z3 626 aaKnown RBP17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 KCNE2Q9Y6J6 123 aa17.66■□□□□ 0.42
CHRFAM7A-202ENST00000397827 NOTOA8MTQ0 251 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 INMTO95050 263 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CEBPBP17676 345 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 IRS1P35568 1242 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CLK3P49761 638 aaKnown RBP17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 HNRNPFP52597 415 aaKnown RBP17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CRYBA2P53672 197 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 MEF2AQ02078 507 aaPredicted RBP17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ZNF33BQ06732 778 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 RFX4Q33E94 735 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ANGPTL8Q6UXH0 198 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SLCO4C1Q6ZQN7 724 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CBLL1Q75N03 491 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TRAPPC5Q8IUR0 188 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 OR4K1Q8NGD4 311 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CHTF18Q8WVB6 975 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 NODALQ96S42 347 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 OR2AG1Q9H205 316 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 RAD18Q9NS91 495 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 C1orf105O95561 183 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ANGPTL1O95841 491 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SEMG1P04279 462 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 IDSP22304 550 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 RYKP34925 604 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CTNNB1P35222 781 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GABARAPL2P60520 117 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 E2F2Q14209 437 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 MOGQ16653 247 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ERICH5Q6P6B1 374 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 EIF3MQ7L2H7 374 aaKnown RBP17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CENPOQ9BU64 300 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 KLHL3Q9UH77 587 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 EXO1Q9UQ84 846 aaKnown RBP17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SNX5Q9Y5X3 404 aa17.65■□□□□ 0.42
CHRFAM7A-202ENST00000397827 C1orf226A1L170 272 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TNFRSF10AO00220 468 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SPINT1O43278 529 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SOD1P00441 154 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 DNAJA1P31689 397 aaKnown RBP17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TUBA3CQ13748 450 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ZNF385BQ569K4 471 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ZC3H12BQ5HYM0 836 aaKnown RBP17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 IER5LQ5T953 404 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 KDM4DQ6B0I6 523 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 LAIR1Q6GTX8 287 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 NPAS3Q8IXF0 933 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 NAGSQ8N159 534 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 PGBD3Q8N328 593 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SYNPOQ8N3V7 929 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 FUNDC2Q9BWH2 189 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TRIT1Q9H3H1 467 aaKnown RBP17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SAGE1Q9NXZ1 904 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 MARK1Q9P0L2 795 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 RAPGEFL1Q9UHV5 662 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 A6NL46 340 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 AXIN1O15169 862 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 PCDH7O60245 1069 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 CYP17A1P05093 508 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ITGAMP11215 1152 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms