RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 FNDC11Q9BVV2 318 aa7.96□□□□□ -1.13
PTPRD-204ENST00000397606 PTBP2Q9UKA9 531 aaKnown RBP7.96□□□□□ -1.13
PTPRD-204ENST00000397606 MGAMO43451 1857 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 A0A1B0GVT2 93 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 FEZF1A0PJY2 475 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 CLIC1O00299 241 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 RNH1P13489 461 aaKnown RBP7.96□□□□□ -1.14
PTPRD-204ENST00000397606 DIO3P55073 304 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 SPANXN4Q5MJ08 99 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 KHDRBS2Q5VWX1 349 aaKnown RBP7.96□□□□□ -1.14
PTPRD-204ENST00000397606 TTC33Q6PID6 262 aaPredicted RBP7.96□□□□□ -1.14
PTPRD-204ENST00000397606 RINLQ6ZS11 566 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 OR4K14Q8NGD5 310 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 GPR151Q8TDV0 419 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 LRRC58Q96CX6 371 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 SLC35A5Q9BS91 424 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 RNPEPL1Q9HAU8 725 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 FGF22Q9HCT0 170 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 PNO1Q9NRX1 252 aaKnown RBP7.96□□□□□ -1.14
PTPRD-204ENST00000397606 EMCNQ9ULC0 261 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 H3BN98 237 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 K7ESM1 405 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 OR6A2O95222 327 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 HBQ1P09105 142 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 UMPSP11172 480 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 BCKDHAP12694 445 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 ALOX12P18054 663 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 MAPK10P53779 464 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 SLC16A1P53985 500 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 CRISP3P54108 245 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 ARSFP54793 590 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 EEFSECP57772 596 aaKnown RBP7.96□□□□□ -1.14
PTPRD-204ENST00000397606 TRIM25Q14258 630 aaKnown RBP7.96□□□□□ -1.14
PTPRD-204ENST00000397606 SMU1Q2TAY7 513 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 CATSPEREQ5SY80 951 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 OR56A1Q8NGH5 318 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 OR1E3Q8WZA6 343 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 NEIL2Q969S2 332 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 MOCOSQ96EN8 888 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 NSMCE3Q96MG7 304 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 BRF2Q9HAW0 419 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 FAM53CQ9NYF3 392 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 TAS2R1Q9NYW7 299 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 SUCOQ9UBS9 1254 aaKnown RBP7.96□□□□□ -1.14
PTPRD-204ENST00000397606 GIMAP2Q9UG22 337 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 KLHL20Q9Y2M5 609 aa7.96□□□□□ -1.14
PTPRD-204ENST00000397606 ZNF646O15015 1829 aaPredicted RBP7.96□□□□□ -1.14
PTPRD-204ENST00000397606 POM121BA6NF01 834 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 CST1P01037 141 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 JUNP05412 331 aaKnown RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 ALOX5P09917 674 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 MAGP20916 626 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 ITPKBP27987 946 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 NOS3P29474 1203 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PRDX1Q06830 199 aaKnown RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 SLAMF1Q13291 335 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 ATG9BQ674R7 924 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 IZUMO2Q6UXV1 221 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PEX5LQ8IYB4 626 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 OR2L8Q8NGY9 312 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 ASB12Q8WXK4 309 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 KIAA1143Q96AT1 154 aaPredicted RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 TEFMQ96QE5 360 aaKnown RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 AIG1Q9NVV5 245 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PLCL2Q9UPR0 1127 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 TRBV5-4A0A0C4DH59 114 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 C1orf226A1L170 272 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PRORSD1PA6NEY8 169 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 TMX2-CTNND1H3BSU7 103 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 ENTPD5O75356 428 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 DRD2P14416 443 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 IGFALSP35858 605 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 GSTM5P46439 218 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 NRG3P56975 720 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 MTPNP58546 118 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PPP2CBP62714 309 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PPP2CAP67775 309 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 METRNLQ641Q3 311 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 LETMD1Q6P1Q0 360 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 KLHDC8AQ8IYD2 350 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PHTF2Q8N3S3 785 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 OR9I1Q8NGQ6 314 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 UTP15Q8TED0 518 aaKnown RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 SLC47A1Q96FL8 570 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 TMEM202A6NGA9 273 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PEX12O00623 359 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 SLC25A12O75746 678 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 HIST1H2ABP04908 130 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 CALRP27797 417 aaKnown RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 IL12BP29460 328 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 KLC1Q07866 573 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PPP1R3AQ16821 1122 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PYCR3Q53H96 274 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 NAIF1Q69YI7 327 aaPredicted RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 OR4C11Q6IEV9 310 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 CASP12Q6UXS9 341 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 DEF8Q6ZN54 512 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 HIST3H2AQ7L7L0 130 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 FAM160A2Q8N612 972 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms