RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 YY2O15391 372 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 SLC31A1O15431 190 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 KCNK5O95279 499 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 SOX14O95416 240 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 GSTM1P09488 218 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 MPC1LP0DKB6 136 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 DNAJA1P31689 397 aaKnown RBP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 CTSKP43235 329 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 MAPK12P53778 367 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 HBA1P69905 142 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 RPP38P78345 283 aaKnown RBP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 GSTM4Q03013 218 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 CDK5R2Q13319 367 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 GAB1Q13480 694 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 SCARB2Q14108 478 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 CYP2A13Q16696 494 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 C2orf27AQ580R0 203 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 LIPJQ5W064 366 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZNF551Q7Z340 670 aaPredicted RBP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 REPS1Q96D71 796 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 MCCC1Q96RQ3 725 aaPredicted RBP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 MBOAT4Q96T53 435 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 SMAD5Q99717 465 aaKnown RBP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 NLNQ9BYT8 704 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 C8orf4Q9NR00 106 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 ATAD3AQ9NVI7 634 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 USE1Q9NZ43 259 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 HSFX1Q9UBD0 423 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 TMED5Q9Y3A6 229 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 PCDHB11Q9Y5F2 797 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 TMEM247A6NEH6 219 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 RGS10O43665 173 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 NME6O75414 186 aaPredicted RBP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 CYP17A1P05093 508 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 TPP2P29144 1249 aaPredicted RBP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 ASMTP46597 345 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 DAPP51397 102 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 RPS26P11Q5JNZ5 115 aaPredicted RBP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 GCNT6Q5T4J0 391 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 ANXA8L1Q5VT79 327 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 PAGE2Q7Z2X7 111 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 HEATR4Q86WZ0 1026 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 RNF168Q8IYW5 571 aaPredicted RBP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 C7orf61Q8IZ16 206 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 OR9Q2Q8NGE9 314 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZNF689Q96CS4 500 aaPredicted RBP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 VPS35Q96QK1 796 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 FEVQ99581 238 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 IGLON5A6NGN9 336 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZNF99A8MXY4 864 aaPredicted RBP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 SCAMP2O15127 329 aaKnown RBP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 PRSS23O95084 383 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 LCKP06239 509 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 C8orf89P0DMQ9 161 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 TIA1P31483 386 aaKnown RBP eCLIP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 TGFBR1P36897 503 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 TRPC1P48995 793 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 NCS1P62166 190 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 SPATS1Q496A3 300 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 PRAMEF14Q5SWL7 426 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 PRAMEF13Q5VWM6 474 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 CPZQ66K79 652 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 TMIGD1Q6UXZ0 262 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZNF605Q86T29 641 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 AMZ2Q86W34 360 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 HOMEZQ8IX15 550 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 LGI4Q8N135 537 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 CACTIN-AS1Q8N1I8 211 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 VN1R2Q8NFZ6 395 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 OR9A1PQ8NGU1 263 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 SLC5A11Q8WWX8 675 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 ECHDC3Q96DC8 303 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 TOX2Q96NM4 488 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 DACH2Q96NX9 599 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 SPNS1Q9H2V7 528 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 C11orf16Q9NQ32 467 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 TUBA8Q9NY65 449 aaPredicted RBP10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 AP3M1Q9Y2T2 418 aa10.04□□□□□ -0.8
CPSF1P1-201ENST00000397477 PIPSLA2A3N6 862 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 FAM227AF5H4B4 570 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 QSOX1O00391 747 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 UGT2B11O75310 529 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 BCHEP06276 602 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 SLC35G4P0C7Q5 338 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZNF8P17098 575 aaPredicted RBP10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 FPR1P21462 350 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 SLC6A12P48065 614 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 NRIP1P48552 1158 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 SPCS2Q15005 226 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 MED22Q15528 200 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 RBM48Q5RL73 367 aaKnown RBP10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 LSRQ86X29 649 aaPredicted RBP10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 SLC15A4Q8N697 577 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 OR10G2Q8NGC3 310 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 RPL3LQ92901 407 aaKnown RBP10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 CEP44Q9C0F1 390 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 KLHL25Q9H0H3 589 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 FZD3Q9NPG1 666 aa10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 FAM120CQ9NX05 1096 aaKnown RBP10.03□□□□□ -0.8
CPSF1P1-201ENST00000397477 PSME2Q9UL46 239 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms