RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 A0A1B0GVC2 190 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 KANTRA0A1W2PQU2 76 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 TLR4O00206 839 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 PSMD9O00233 223 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 INPPL1O15357 1258 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 FAM189A1O60320 539 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 PFKLP17858 780 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 CD72P21854 359 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 SELENOVP59797 346 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 MRPL49Q13405 166 aaKnown RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 UPP1Q16831 310 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ALG10Q5BKT4 473 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 PRAMEF17Q5VTA0 474 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 MSANTD1Q6ZTZ1 278 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 GRHL3Q8TE85 626 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 CANT1Q8WVQ1 401 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 SCLYQ96I15 445 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 TSGA13Q96PP4 275 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 PKP4Q99569 1192 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 TIGARQ9NQ88 270 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 WDR45Q9Y484 360 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 A0A1W2PRQ8 180 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 CCL5P13501 91 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 MC1RQ01726 317 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 KCNC4Q03721 635 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 CCL14Q16627 93 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 MEDAGQ5VYS4 303 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 UNQ6126/PRO20091Q6UXV3 157 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 FAM83CQ9BQN1 747 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 HSD3B7Q9H2F3 369 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 DZANK1Q9NVP4 752 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 EIF3KQ9UBQ5 218 aaKnown RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 PHRF1Q9P1Y6 1649 aaKnown RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 OR51F1A6NGY5 319 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 LOC730098B7Z3J9 87 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ITM2AO43736 263 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 MTHFD1P11586 935 aaKnown RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 PGAM2P15259 253 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 EPCAMP16422 314 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 SLC18A2Q05940 514 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 RBM20Q5T481 1227 aaKnown RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 OR4F3Q6IEY1 312 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ANO7Q6IWH7 933 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 REEP3Q6NUK4 255 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 OR4K17Q8NGC6 315 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 PHOSPHO1Q8TCT1 267 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 TMEM80Q96HE8 168 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 SEC61A2Q9H9S3 476 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 TPT1P8Q9HAU6 139 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 GIN1Q9NXP7 522 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 NWD2Q9ULI1 1742 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 LTBP3Q9NS15 1303 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 TCRBV7S3A2A0A539 114 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 C2orf74A8MZ97 194 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 PIRO00625 290 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 DNAJB5O75953 348 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 IFNA7P01567 189 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 HLA-DPB1P04440 258 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ITGA5P08648 1049 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 PET100P0DJ07 73 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 RPL10P27635 214 aaKnown RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 SLC15A1P46059 708 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ARRB1P49407 418 aaPredicted RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 GALK1P51570 392 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 OR12D2P58182 307 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ARPC4P59998 168 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 PCLAFQ15004 111 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF630Q2M218 657 aaPredicted RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF678Q5SXM1 525 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 AGTRAPQ6RW13 159 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 OR4E2Q8NGC2 313 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 OR8J3Q8NGG0 315 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 OR5AK3PQ8NH89 298 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 FAM129BQ96TA1 746 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 NPY6RQ99463 290 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 SLC6A15Q9H2J7 730 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 TMEM9Q9P0T7 183 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ARPC2O15144 300 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 GSTT2P0CG29 244 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ELOCQ15369 112 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 PITRM1Q5JRX3 1037 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 GRASPQ7Z6J2 395 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 GALNT15Q8N3T1 639 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 NEDD4LQ96PU5 975 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ALPK1Q96QP1 1244 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 GKN1Q9NS71 199 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 PRODH2Q9UF12 536 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 HAPLN1P10915 354 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 HK1P19367 917 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TCEAL1Q15170 157 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 PTCHD3Q3KNS1 767 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 GPRC6AQ5T6X5 926 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 KIAA1161Q6NSJ0 714 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 KBTBD6Q86V97 674 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 NFKBIDQ8NI38 313 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 DCSTAMPQ9H295 470 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TMEM184CQ9NVA4 438 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 MGAT4BQ9UQ53 548 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF451Q9Y4E5 1061 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 A0A0J9YVX5 310 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms