RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 TEX13AQ9BXU3 409 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P10-201ENST00000395823 MTMR12Q9C0I1 747 aa4.49□□□□□ -1.69
HMGB1P10-201ENST00000395823 EGLN3Q9H6Z9 239 aa4.49□□□□□ -1.69
HMGB1P10-201ENST00000395823 ZFP57Q9NU63 452 aa4.49□□□□□ -1.69
HMGB1P10-201ENST00000395823 INTS9Q9NV88 658 aaKnown RBP4.49□□□□□ -1.69
HMGB1P10-201ENST00000395823 PILRBQ9UKJ0 227 aa4.49□□□□□ -1.69
HMGB1P10-201ENST00000395823 KCNJ14Q9UNX9 436 aa4.49□□□□□ -1.69
HMGB1P10-201ENST00000395823 DOCK7Q96N67 2140 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 A0A1B0GUV1 79 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 SRRM4A7MD48 611 aaKnown RBP4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 SNURFLB1AK76 121 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 SLC28A1O00337 649 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 PSMD3O43242 534 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 TXNL1O43396 289 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 KIF5CO60282 957 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 GLRA3O75311 464 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 CDK2AP2O75956 126 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 PTBP3O95758 552 aaKnown RBP4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 TGFAP01135 160 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 CHRNGP07510 517 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 CDK4P11802 303 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 GJB2P29033 226 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 OR1D2P34982 312 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 TNFSF10P50591 281 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 DNA2P51530 1060 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 CLCN4P51793 760 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 HNRNPFP52597 415 aaKnown RBP4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 POLR2FP61218 127 aaKnown RBP4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 SLC3A1Q07837 685 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 CDH18Q13634 790 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 PDLIM3Q53GG5 364 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 ZNF324BQ6AW86 544 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 DHRS11Q6UWP2 260 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 TMEM207Q6UWW9 146 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 C9orf139Q6ZV77 190 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 SLC16A9Q7RTY1 509 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 SIDT2Q8NBJ9 832 aaKnown RBP4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 SLC37A3Q8NCC5 494 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 OR7A2PQ8NGA2 310 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 OR4C15Q8NGM1 316 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 METTL21AQ8WXB1 218 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 TAF4BQ92750 862 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 HAS2Q92819 552 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 LYZL4Q96KX0 146 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 SAMD8Q96LT4 415 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 TSGA13Q96PP4 275 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 NEDD4LQ96PU5 975 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 FAM213AQ9BRX8 229 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 TSPY26PQ9H489 355 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 DPEP3Q9H4B8 488 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 BICC1Q9H694 974 aaKnown RBP4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 LIN28AQ9H9Z2 209 aaKnown RBP4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 SIX2Q9NPC8 291 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 ECHDC1Q9NTX5 307 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 PIGVQ9NUD9 493 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 FAM118AQ9NWS6 357 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 TAS2R3Q9NYW6 316 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 FLRT3Q9NZU0 649 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 EPS15L1Q9UBC2 864 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 HOOK1Q9UJC3 728 aaKnown RBP4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 TSPAN16Q9UKR8 245 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 DNPEPQ9ULA0 475 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 PPP2R2CQ9Y2T4 447 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 SH3GLB1Q9Y371 365 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 CLCA3PQ9Y6N3 262 aa4.48□□□□□ -1.69
HMGB1P10-201ENST00000395823 NPHP3Q7Z494 1330 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 MACROD2A1Z1Q3 448 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 SERINC4A6NH21 518 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 ZNF732B4DXR9 585 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 M0R296 226 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 CHUKO15111 745 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 MAGEB2O15479 319 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 SOCS5O75159 536 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 PRDM1O75626 825 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 NADKO95544 446 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 PDGFBP01127 241 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 CXCL10P02778 98 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 ODC1P11926 461 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 CPA3P15088 417 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 B4GALT1P15291 398 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 AREGP15514 252 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 PAX1P15863 534 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 CETN2P41208 172 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 OR3A3P47888 321 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 NR0B1P51843 470 aaKnown RBP4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 HTD2P86397 168 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 ARL16Q0P5N6 197 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 TSTA3Q13630 321 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 DLEU7Q6UYE1 221 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 RBMS3Q6XE24 437 aaKnown RBP4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 WDR88Q6ZMY6 472 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 G2E3Q7L622 706 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 SMIM29Q86T20 159 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 THEM5Q8N1Q8 247 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 KDM8Q8N371 416 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 FBXW8Q8N3Y1 598 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 GBP7Q8N8V2 638 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 MAB21L3Q8N8X9 362 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 OR1L3Q8NH93 324 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 CD99L2Q8TCZ2 262 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms