RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 MS4A12Q9NXJ0 267 aa6.09□□□□□ -1.43
NXF3-201ENST00000395065 MPP6Q9NZW5 540 aa6.09□□□□□ -1.43
NXF3-201ENST00000395065 PLEKHB1Q9UF11 243 aaPredicted RBP6.09□□□□□ -1.43
NXF3-201ENST00000395065 STUB1Q9UNE7 303 aa6.09□□□□□ -1.43
NXF3-201ENST00000395065 VPS9D1Q9Y2B5 631 aa6.09□□□□□ -1.43
NXF3-201ENST00000395065 POFUT2Q9Y2G5 429 aa6.09□□□□□ -1.43
NXF3-201ENST00000395065 HSPB11Q9Y547 144 aa6.09□□□□□ -1.43
NXF3-201ENST00000395065 HS3ST4Q9Y661 456 aa6.09□□□□□ -1.43
NXF3-201ENST00000395065 U3KQ87 197 aa6.09□□□□□ -1.43
NXF3-201ENST00000395065 ALPK3Q96L96 1907 aa6.09□□□□□ -1.43
NXF3-201ENST00000395065 HYKKA2RU49 373 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 PRR23AA6NEV1 266 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 FABP12A6NFH5 140 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 NPIPB8E9PQR5 432 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 CLIC1O00299 241 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 MYL12BO14950 172 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 TAPBPO15533 448 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 MPZL2O60487 215 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 ULK1O75385 1050 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 GPR32O75388 356 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 NDUFS3O75489 264 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 RFPL3O75679 317 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 SCO1O75880 301 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 CSF2P04141 144 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 CYP17A1P05093 508 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 PRPS2P11908 318 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 IFI30P13284 250 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 MYL12AP19105 171 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 PRPH2P23942 346 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 HLA-FP30511 346 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 HMGCLP35914 325 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 MAP2K3P46734 347 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 BRCC3P46736 316 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 SOX9P48436 509 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 HMGCS1Q01581 520 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 MTAPQ13126 283 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 PPIGQ13427 754 aaKnown RBP eCLIP6.09□□□□□ -1.44
NXF3-201ENST00000395065 ZNF792Q3KQV3 632 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 ZNF628Q5EBL2 1059 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 PDZK1Q5T2W1 519 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 ALG1LQ6GMV1 187 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 METTL2BQ6P1Q9 378 aaKnown RBP6.09□□□□□ -1.44
NXF3-201ENST00000395065 AFTPHQ6ULP2 937 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 KIF18BQ86Y91 864 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 GPALPP1Q8IXQ4 340 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 FAM9CQ8IZT9 166 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 GHDCQ8N2G8 530 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 SYNPOQ8N3V7 929 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 SIDT2Q8NBJ9 832 aaKnown RBP6.09□□□□□ -1.44
NXF3-201ENST00000395065 ZNF680Q8NEM1 530 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 OR4C15Q8NGM1 316 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 VANGL1Q8TAA9 524 aaPredicted RBP6.09□□□□□ -1.44
NXF3-201ENST00000395065 ENKURQ8TC29 256 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 HMCESQ96FZ2 354 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 SENP8Q96LD8 212 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 NECTIN4Q96NY8 510 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 QRFPRQ96P65 431 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 TRIB3Q96RU7 358 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 KCNJ15Q99712 375 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 ZSCAN5AQ9BUG6 496 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 KATNAL1Q9BW62 490 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 SPATA9Q9BWV2 254 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 PPP1R3EQ9H7J1 279 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 HEXA-AS1Q9H8Q6 139 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 SLC25A19Q9HC21 320 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 ABCB9Q9NP78 766 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 FARSBQ9NSD9 589 aaKnown RBP6.09□□□□□ -1.44
NXF3-201ENST00000395065 ABCC13Q9NSE7 274 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 TMEM248Q9NWD8 314 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 NDUFB11Q9NX14 153 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 TAS2R16Q9NYV7 291 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 TRPS1Q9UHF7 1281 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 PCDHGB7Q9Y5F8 929 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 COMMD10Q9Y6G5 202 aa6.09□□□□□ -1.44
NXF3-201ENST00000395065 LINC00854A0A1B0GVQ3 168 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 A0A1W2PQL4 384 aaPredicted RBP6.08□□□□□ -1.44
NXF3-201ENST00000395065 RPS10-NUDT3A0A1W2PQS6 291 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 WASHC1A8K0Z3 465 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 RFXANKO14593 260 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 ADAMDEC1O15204 470 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 FFAR2O15552 330 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 NDUFA2O43678 99 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 SCN2BO60939 215 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 ZNF623O75123 536 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 NIPSNAP2O75323 286 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 GLUD1P00367 558 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 IGHA2P01877 340 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 FHP07954 510 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 MSL3P1P0C860 447 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 EBLN1P0CF75 366 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 ACPPP15309 386 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 ZNF250P15622 560 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 ARSBP15848 533 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 RHOQP17081 205 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 TNNI3P19429 210 aa6.08□□□□□ -1.44
NXF3-201ENST00000395065 IGFBP6P24592 240 aaPredicted RBP6.08□□□□□ -1.44
NXF3-201ENST00000395065 PTBP1P26599 531 aaKnown RBP eCLIP6.08□□□□□ -1.44
NXF3-201ENST00000395065 NUP214P35658 2090 aaPredicted RBP6.08□□□□□ -1.44
NXF3-201ENST00000395065 IDH2P48735 452 aaKnown RBP6.08□□□□□ -1.44
NXF3-201ENST00000395065 CLCN7P51798 805 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms