RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 CYP4F3Q08477 520 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 PPP1R8Q12972 351 aaKnown RBP13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 HIST2H2ACQ16777 129 aaPredicted RBP13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 WDR45BQ5MNZ6 344 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 HIST2H2AA3Q6FI13 130 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 ARPINQ7Z6K5 226 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 AQP12AQ8IXF9 295 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 MSRB3Q8IXL7 192 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 CATSPER1Q8NEC5 780 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 HUS1BQ8NHY5 278 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 CMTM7Q96FZ5 175 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 USP34Q70CQ2 3546 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 GNG14A0A1W2PPG7 69 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 TRIM64A6NGJ6 449 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 TRIM64BA6NI03 449 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 B4DGG1 531 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 ARNTLO00327 626 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 SDC3O75056 442 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 GMNNO75496 209 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 TGFB1P01137 390 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 HOXD12P35452 270 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 RPS13P62277 151 aaKnown RBP13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 Q6ZSR6 202 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 GPR180Q86V85 440 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 TICAM1Q8IUC6 712 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 CLEC4FQ8N1N0 589 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 FAM86B1Q8N7N1 296 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 OR7G3Q8NG95 312 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 ZNF583Q96ND8 569 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 ANAPC2Q9UJX6 822 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 OAZ3Q9UMX2 235 aa13.49□□□□□ -0.25
PPP3CA-202ENST00000394853 PLXNA2O75051 1894 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 AHCYL1O43865 530 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 PGM3O95394 542 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 PAPLNO95428 1278 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 MRPL19P49406 292 aaKnown RBP13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 CASP9P55211 416 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 HKDC1Q2TB90 917 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 CAPN13Q6MZZ7 669 aaPredicted RBP13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 PNCKQ6P2M8 343 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 ERMP1Q7Z2K6 904 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 SMYD1Q8NB12 490 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 SGCDQ92629 289 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 TFGQ92734 400 aaPredicted RBP13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 SPNS1Q9H2V7 528 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 LIN7AO14910 233 aaPredicted RBP13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 COX7A2P14406 83 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 CLDN8P56748 225 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 SLBPQ14493 270 aaKnown RBP eCLIP13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 GGTA1PQ4G0N0 100 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 LIPJQ5W064 366 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 KIAA1161Q6NSJ0 714 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 LMX1AQ8TE12 382 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 MSANTD3Q96H12 275 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 REXO4Q9GZR2 422 aaKnown RBP13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 OR51B5Q9H339 312 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 NEUROG3Q9Y4Z2 214 aa13.48□□□□□ -0.25
PPP3CA-202ENST00000394853 H0Y8X5 98 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 RFXANKO14593 260 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 LINGO3P0C6S8 592 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 ATP6V1B1P15313 513 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 CCR3P51677 355 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 CDK3Q00526 305 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 UAP1L1Q3KQV9 507 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 PYCR3Q53H96 274 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 OTUD3Q5T2D3 398 aaPredicted RBP13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 AGBL4Q5VU57 503 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 FAM180BQ6P0A1 224 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 ZNF621Q6ZSS3 439 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 GRAMD2AQ8IUY3 354 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 CLECL1Q8IZS7 167 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 GLB1L3Q8NCI6 653 aaPredicted RBP13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 WDR92Q96MX6 357 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 BTBD9Q96Q07 612 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 CHID1Q9BWS9 393 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 NUP210Q8TEM1 1887 aaPredicted RBP13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 ABCA7Q8IZY2 2146 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 A0A1W2PRQ8 180 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 A6NHS1 94 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 CHURC1-FNTBB4DL54 471 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 ANHXE9PGG2 379 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 TNFP01375 233 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 ABCB1P08183 1280 aaPredicted RBP13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 NPPBP16860 134 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 COL9A1P20849 921 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 ALDH4A1P30038 563 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 FNTBP49356 437 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 CSNK1EP49674 416 aaKnown RBP13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 DAB2P98082 770 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 TMEM52BQ4KMG9 183 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 AASDHQ4L235 1098 aaPredicted RBP13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 LSM14AQ8ND56 463 aaKnown RBP13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 OR9A1PQ8NGU1 263 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 WDR20Q8TBZ3 569 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 GBP5Q96PP8 586 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 Q9H521 79 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 C6orf106Q9H6K1 298 aaPredicted RBP13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 SH3BP4Q9P0V3 963 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 UTS2RQ9UKP6 389 aa13.47□□□□□ -0.25
PPP3CA-202ENST00000394853 SPAG17Q6Q759 2223 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms