RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 NUDCD3Q8IVD9 361 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 OR11G2Q8NGC1 345 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 OR2L8Q8NGY9 312 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 RAB3IL1Q8TBN0 382 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 RDH11Q8TC12 318 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 FAR1Q8WVX9 515 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 SCYL1Q96KG9 808 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 OLFM1Q99784 485 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 LHPPQ9H008 270 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 NMRAL1Q9HBL8 299 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 TMEM216Q9P0N5 145 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 STOX2Q9P2F5 926 aaPredicted RBP17.74■□□□□ 0.43
SNCB-202ENST00000393693 POLEQ07864 2286 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 PCM1Q15154 2024 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 KRT87PA6NCN2 255 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 VSTM2BA6NLU5 285 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 NRP2O60462 931 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 CTSVO60911 334 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 PROCP04070 461 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 LTA4HP09960 611 aaKnown RBP17.73■□□□□ 0.43
SNCB-202ENST00000393693 EDN3P14138 238 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 PRF1P14222 555 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 CDKN2DP55273 166 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 VSX2P58304 361 aaPredicted RBP17.73■□□□□ 0.43
SNCB-202ENST00000393693 IRF9Q00978 393 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 ZC3H12BQ5HYM0 836 aaKnown RBP17.73■□□□□ 0.43
SNCB-202ENST00000393693 ATG16L1Q676U5 607 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 CPLX4Q7Z7G2 160 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 DCUN1D3Q8IWE4 304 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 PRSS58Q8IYP2 241 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 NKAPQ8N5F7 415 aaKnown RBP17.73■□□□□ 0.43
SNCB-202ENST00000393693 TTC29Q8NA56 475 aaPredicted RBP17.73■□□□□ 0.43
SNCB-202ENST00000393693 KCTD4Q8WVF5 259 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 ASZ1Q8WWH4 475 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 KCNJ9Q92806 393 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 SLC22A18Q96BI1 424 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 ZNF285Q96NJ3 590 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 P2RY12Q9H244 342 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 EPS8L2Q9H6S3 715 aa17.73■□□□□ 0.43
SNCB-202ENST00000393693 TRMT6Q9UJA5 497 aaKnown RBP17.73■□□□□ 0.43
SNCB-202ENST00000393693 DOCK10Q96BY6 2186 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 NUP210LQ5VU65 1888 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 ARHGAP10A1A4S6 786 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 WDR91A4D1P6 747 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 PRICKLE3O43900 615 aaPredicted RBP17.72■□□□□ 0.43
SNCB-202ENST00000393693 ZG16O60844 167 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 BPGMP07738 259 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 RBP1P09455 135 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 CCDC166P0CW27 439 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 CHRM3P20309 590 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 PSMB5P28074 263 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 ASPHQ12797 758 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 ZRSR2Q15696 482 aaKnown RBP17.72■□□□□ 0.43
SNCB-202ENST00000393693 CCSMST1Q4G0I0 132 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 TCTE1Q5JU00 501 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 WASHC2DQ5SRD0 308 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 FRMPD2BQ6IN97 320 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 PLD6Q8N2A8 252 aaKnown RBP17.72■□□□□ 0.43
SNCB-202ENST00000393693 PPP1R14CQ8TAE6 165 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 C8orf44Q96CB5 159 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 BIRC8Q96P09 236 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 TSSK1BQ9BXA7 367 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 C12orf65Q9H3J6 166 aaKnown RBP17.72■□□□□ 0.43
SNCB-202ENST00000393693 MANSC1Q9H8J5 431 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 ZNF160Q9HCG1 818 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 SEMA3GQ9NS98 782 aa17.72■□□□□ 0.43
SNCB-202ENST00000393693 INTS7Q9NVH2 962 aaKnown RBP17.72■□□□□ 0.43
SNCB-202ENST00000393693 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.72■□□□□ 0.43
SNCB-202ENST00000393693 LOC105369274A0A096LPK9 316 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 LOC102723532A0A0G2JNH3 316 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 A0A0J9YVX5 310 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 FITM1A5D6W6 292 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 RPN2P04844 631 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 CPA3P15088 417 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 AOAHP28039 575 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 BDKRB1P46663 353 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 PRKAA2P54646 552 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 KLC1Q07866 573 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 CSHL1Q14406 222 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 ZNF460Q14592 562 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 ACAP2Q15057 778 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 TLR1Q15399 786 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 YOD1Q5VVQ6 348 aaPredicted RBP17.71■□□□□ 0.43
SNCB-202ENST00000393693 LRRC8EQ6NSJ5 796 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 ISLR2Q6UXK2 745 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 UNC5DQ6UXZ4 953 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 FJX1Q86VR8 437 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 CENPLQ8N0S6 344 aaPredicted RBP17.71■□□□□ 0.43
SNCB-202ENST00000393693 OR4N4Q8N0Y3 316 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 BCAS4Q8TDM0 211 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 ZNF75CPQ92670 426 aaPredicted RBP17.71■□□□□ 0.43
SNCB-202ENST00000393693 NXNL1Q96CM4 212 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 PANX3Q96QZ0 392 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 MIPEPQ99797 713 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 MRPL57Q9BQC6 102 aaKnown RBP17.71■□□□□ 0.43
SNCB-202ENST00000393693 CRB3Q9BUF7 120 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 MRPL46Q9H2W6 279 aaKnown RBP17.71■□□□□ 0.43
SNCB-202ENST00000393693 NXT1Q9UKK6 140 aaKnown RBP17.71■□□□□ 0.43
SNCB-202ENST00000393693 EMCNQ9ULC0 261 aa17.71■□□□□ 0.43
SNCB-202ENST00000393693 CCDC189A1A4V9 331 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms