RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CPTPQ5TA50 214 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 DEPDC1Q5TB30 811 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 GALNT18Q6P9A2 607 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 ARPINQ7Z6K5 226 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 TRIM73Q86UV7 250 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 SPATA24Q86W54 205 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 GKN2Q86XP6 184 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 TMEM132CQ8N3T6 1108 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 ENDOVQ8N8Q3 282 aaKnown RBP8.27□□□□□ -1.09
TDP1-203ENST00000393454 TTLQ8NG68 377 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 C16orf78Q8WTQ4 265 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 ZFPM2Q8WW38 1151 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 NELL1Q92832 810 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 ASB9Q96DX5 294 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 RSRC1Q96IZ7 334 aaKnown RBP8.27□□□□□ -1.09
TDP1-203ENST00000393454 LRGUKQ96M69 825 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 NECAB3Q96P71 396 aaPredicted RBP8.27□□□□□ -1.09
TDP1-203ENST00000393454 KCTD14Q9BQ13 255 aaPredicted RBP8.27□□□□□ -1.09
TDP1-203ENST00000393454 S100A14Q9HCY8 104 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 SH3BP4Q9P0V3 963 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 ABCD2Q9UBJ2 740 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 SPASTQ9UBP0 616 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 MCM8Q9UJA3 840 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 MAPRE3Q9UPY8 281 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 COL6A3P12111 3177 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 SPAG17Q6Q759 2223 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 CACNA1IQ9P0X4 2223 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 THADAQ6YHU6 1953 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 PLPP1O14494 284 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 NVLO15381 856 aaKnown RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 BCAT2O15382 392 aaPredicted RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 NDUFS4O43181 175 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 DNAJA2O60884 412 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 CLEC3AO75596 197 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 B3GALT4O96024 378 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 GSNP06396 782 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 LAMP1P11279 417 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 HOXB3P14651 431 aaPredicted RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 UGT2B7P16662 529 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 EFNA1P20827 205 aaPredicted RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 GRIA3P42263 894 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 MTPNP58546 118 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 UBE2IP63279 158 aaKnown RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 HHEXQ03014 270 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 SIGLEC14Q08ET2 396 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 TRAP1Q12931 704 aaKnown RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 TJAP1Q5JTD0 557 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 CWF19L1Q69YN2 538 aaKnown RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 CYP2R1Q6VVX0 501 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 PRR23BQ6ZRT6 265 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 PAGE2Q7Z2X7 111 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 DHFR2Q86XF0 187 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 RGMAQ96B86 450 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 MACROD1Q9BQ69 325 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 ECSITQ9BQ95 431 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 INPP5KQ9BT40 448 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 THUMPD3Q9BV44 507 aaKnown RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 DUSP26Q9BV47 211 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 REXO4Q9GZR2 422 aaKnown RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 KCNH6Q9H252 994 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 ALG2Q9H553 416 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 HRASLS2Q9NWW9 162 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 SIRT5Q9NXA8 310 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 ACTR10Q9NZ32 417 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 VAPAQ9P0L0 249 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 EGFL7Q9UHF1 273 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 ANGPTL2Q9UKU9 493 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 A0A096LPI6 279 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 A0A0G2JN53 185 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 GABRR3A8MPY1 467 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 C2orf74A8MZ97 194 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 RFXANKO14593 260 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 ACOT8O14734 319 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 YY2O15391 372 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 SDC3O75056 442 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 ERN1O75460 977 aaKnown RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 SEMA3DO95025 777 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 TBX6O95947 436 aaPredicted RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 HSD17B1P14061 328 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 ANPEPP15144 967 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 DHPSP49366 369 aaPredicted RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 GSK3BP49841 420 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 PLA2G16P53816 162 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 MAZP56270 477 aaKnown RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 EEFSECP57772 596 aaKnown RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 NXPH1P58417 271 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 MRPS22P82650 360 aaKnown RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 MC1RQ01726 317 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 SLC34A1Q06495 639 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 SELPLGQ14242 412 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 ARMC6Q6NXE6 501 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 AAGABQ6PD74 315 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 TMEM26Q6ZUK4 368 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 MFSD9Q8NBP5 474 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 VPS37AQ8NEZ2 397 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 CREB3L4Q8TEY5 395 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 ANKRD27Q96NW4 1050 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 QRFPRQ96P65 431 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 GBP5Q96PP8 586 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 OR2A14Q96R47 310 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms