RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 SUN1O94901 812 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 SLITRK3O94933 977 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 VTNP04004 478 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 CKMT2P17540 419 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 EIF4HQ15056 248 aaKnown RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 HNRNPA1L2Q32P51 320 aaKnown RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 ASPRV1Q53RT3 343 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 AWAT1Q58HT5 328 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 AGBL2Q5U5Z8 902 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 FAM90A2PQ658T7 463 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 TXNDC8Q6A555 127 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 ASPHD2Q6ICH7 369 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 CWC27Q6UX04 472 aaKnown RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 VSTM1Q6UX27 236 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 CENPUQ71F23 418 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 LINGO2Q7L985 606 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 FRMD5Q7Z6J6 570 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 ZC3HC1Q86WB0 502 aaKnown RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 KLHDC8AQ8IYD2 350 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 ZDHHC23Q8IYP9 409 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 DNAJC22Q8N4W6 341 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 ZNF276Q8N554 614 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 RNF148Q8N7C7 305 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 PNPLA1Q8N8W4 532 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 TP53I13Q8NBR0 393 aaPredicted RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 OR4A15Q8NGL6 344 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 C9orf43Q8TAL5 461 aaPredicted RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 ERGIC1Q969X5 290 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 COPS8Q99627 209 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 CHP1Q99653 195 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 ATG101Q9BSB4 218 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 OSBPL10Q9BXB5 764 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 IRX2Q9BZI1 471 aaPredicted RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 PARVGQ9HBI0 331 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 MYNNQ9NPC7 610 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 RNF186Q9NXI6 227 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 GRIP1Q9Y3R0 1128 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 ZNF644Q9H582 1327 aaPredicted RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 PDLIM1O00151 329 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 ADAM23O75077 832 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 STX11O75558 287 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 TTLL1O95922 423 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 RBM34P42696 430 aaKnown RBP3.4□□□□□ -1.87
XRN1-202ENST00000392981 RANBP1P43487 201 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 RPL21P46778 160 aaKnown RBP3.4□□□□□ -1.87
XRN1-202ENST00000392981 PSMD7P51665 324 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 RPS15P62841 145 aaKnown RBP3.4□□□□□ -1.87
XRN1-202ENST00000392981 SREBF2Q12772 1141 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 MADCAM1Q13477 382 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 DYRK1AQ13627 763 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 NCF4Q15080 339 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 STILQ15468 1287 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 BMT2Q1RMZ1 405 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 PPP6R3Q5H9R7 873 aaPredicted RBP3.4□□□□□ -1.87
XRN1-202ENST00000392981 SERPINA9Q86WD7 417 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 CCDC50Q8IVM0 306 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 REXO1L1PQ8IX06 675 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 ATP6V0D2Q8N8Y2 350 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 CCDC197Q8NCU1 140 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 TRIM58Q8NG06 486 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 CHMP6Q96FZ7 201 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 NAF1Q96HR8 494 aaKnown RBP3.4□□□□□ -1.87
XRN1-202ENST00000392981 DEFB118Q96PH6 123 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 ACOX2Q99424 681 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 ALKBH7Q9BT30 221 aaPredicted RBP3.4□□□□□ -1.87
XRN1-202ENST00000392981 ABHD6Q9BV23 337 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 MRPL47Q9HD33 250 aaKnown RBP3.4□□□□□ -1.87
XRN1-202ENST00000392981 TNNQ9UQP3 1299 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 TMED7Q9Y3B3 224 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 TMEM120BA0PK00 339 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 K7ERI5 159 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 KCNAB3O43448 404 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 CSO75390 466 aaKnown RBP3.4□□□□□ -1.87
XRN1-202ENST00000392981 OTCP00480 354 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 HEXAP06865 529 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 GFAPP14136 432 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 SLC2A5P22732 501 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 NUMBP49757 651 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 CCNHP51946 323 aaPredicted RBP3.4□□□□□ -1.87
XRN1-202ENST00000392981 MTAPQ13126 283 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 TEDDM1Q5T9Z0 273 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 LAIR1Q6GTX8 287 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 MAVSQ7Z434 540 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 GPBP1Q86WP2 473 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 SLC7A5P1Q8MH63 180 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 CCDC185Q8N715 623 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 BOLLQ8N9W6 283 aaKnown RBP3.4□□□□□ -1.87
XRN1-202ENST00000392981 KYQ8NBH2 561 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 DDHD1Q8NEL9 900 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 GPT2Q8TD30 523 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 APBB2Q92870 758 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 KRTAP3-3Q9BYR6 98 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 KRTAP3-2Q9BYR7 98 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 SEMA4CQ9C0C4 833 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 UBQLN3Q9H347 655 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 MARCH7Q9H992 704 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 AHSPQ9NZD4 102 aa3.4□□□□□ -1.87
XRN1-202ENST00000392981 ADGBQ8N7X0 1667 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 PMS2P1A4D2B8 440 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 TCP11X1B4DZS4 312 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms