RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 SUPT3HB4E1H0 165 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 TAPBPO15533 448 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 DPM1O60762 260 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 SUPT3HO75486 399 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 KLHL2O95198 593 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 HPP00738 406 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 ALDOAP04075 364 aaKnown RBP12.01□□□□□ -0.49
GGPS1-203ENST00000391855 HEXBP07686 556 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 SERPINA6P08185 405 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 RHOXF2BP0C7M4 288 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 ALOX12P18054 663 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 IL1RNP18510 177 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 GDF5P43026 501 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 MAGEA12P43365 314 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 HSPA7P48741 367 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 AP2B1P63010 937 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 DLG1Q12959 904 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 LAPTM5Q13571 262 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 MYBPC3Q14896 1274 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 TSNAXIP1Q2TAA8 658 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 VWA2Q5GFL6 755 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 PAGE2BQ5JRK9 111 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 TMIGD1Q6UXZ0 262 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 SHISA6Q6ZSJ9 500 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 ZC3H7AQ8IWR0 971 aaKnown RBP12.01□□□□□ -0.49
GGPS1-203ENST00000391855 AFAP1L2Q8N4X5 818 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 SNX31Q8N9S9 440 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 TEX19Q8NA77 164 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 KCT2Q8NC54 265 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 FDCSPQ8NFU4 85 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 KCTD4Q8WVF5 259 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 TM9SF4Q92544 642 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 NXNL1Q96CM4 212 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 WDR34Q96EX3 536 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 PTCD3Q96EY7 689 aaKnown RBP12.01□□□□□ -0.49
GGPS1-203ENST00000391855 OR1F2PQ96R84 312 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 RHOXF2Q9BQY4 288 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 CD244Q9BZW8 370 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 SPNS1Q9H2V7 528 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 FBXL4Q9UKA2 621 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 TMCO1Q9UM00 188 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 POC1B-GALNT4F8VUJ3 575 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 KLHL18O94889 574 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 BMP10O95393 424 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 STATHP02808 62 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 SERPIND1P05546 499 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 COL6A2P12110 1019 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 VARSP26640 1264 aaKnown RBP12□□□□□ -0.49
GGPS1-203ENST00000391855 CASRP41180 1078 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 FOXL2P58012 376 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 STXBP1P61764 594 aaKnown RBP12□□□□□ -0.49
GGPS1-203ENST00000391855 SLBPQ14493 270 aaKnown RBP eCLIP12□□□□□ -0.49
GGPS1-203ENST00000391855 RBBP5Q15291 538 aaKnown RBP12□□□□□ -0.49
GGPS1-203ENST00000391855 TBCCQ15814 346 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 METTL2BQ6P1Q9 378 aaKnown RBP12□□□□□ -0.49
GGPS1-203ENST00000391855 KIRREL2Q6UWL6 708 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 PTRH1Q86Y79 214 aaKnown RBP12□□□□□ -0.49
GGPS1-203ENST00000391855 PRSS58Q8IYP2 241 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 ZNF740Q8NDX6 193 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 OR11G2Q8NGC1 345 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 METTL21AQ8WXB1 218 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12□□□□□ -0.49
GGPS1-203ENST00000391855 UBE2E3Q969T4 207 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 SMAD5Q99717 465 aaKnown RBP12□□□□□ -0.49
GGPS1-203ENST00000391855 SLC6A16Q9GZN6 736 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 RIC8BQ9NVN3 520 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 OPTCQ9UBM4 332 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 C19orf25Q9UFG5 118 aaPredicted RBP12□□□□□ -0.49
GGPS1-203ENST00000391855 FETUBQ9UGM5 382 aa12□□□□□ -0.49
GGPS1-203ENST00000391855 PCSK5Q92824 1860 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 LOC102723996A0A087X1L8 192 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 A0A088AWK7 358 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 J3QKU1 62 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 K7EPI3 171 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 SGK494L7N484 410 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 UBXN8O00124 270 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 RIPK2O43353 540 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 KLK8O60259 260 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 CCNT2O60583 730 aaKnown RBP11.99□□□□□ -0.49
GGPS1-203ENST00000391855 GALR3O60755 368 aaPredicted RBP11.99□□□□□ -0.49
GGPS1-203ENST00000391855 RDH16O75452 317 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 CLEC3AO75596 197 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 RBP1P09455 135 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 ZNF10P21506 573 aaPredicted RBP11.99□□□□□ -0.49
GGPS1-203ENST00000391855 JAK1P23458 1154 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 SERPINB1P30740 379 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 XCR1P46094 333 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 PIK3CGP48736 1102 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 MAT1AQ00266 395 aaKnown RBP11.99□□□□□ -0.49
GGPS1-203ENST00000391855 IRF9Q00978 393 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 IRF8Q02556 426 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 PCDH1Q08174 1060 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 E2F2Q14209 437 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 NAA30Q147X3 362 aaPredicted RBP11.99□□□□□ -0.49
GGPS1-203ENST00000391855 SETDB1Q15047 1291 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 HIST2H2ACQ16777 129 aaPredicted RBP11.99□□□□□ -0.49
GGPS1-203ENST00000391855 C18orf21Q32NC0 220 aaPredicted RBP11.99□□□□□ -0.49
GGPS1-203ENST00000391855 XKR6Q5GH73 641 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 UBAP2Q5T6F2 1119 aaKnown RBP11.99□□□□□ -0.49
GGPS1-203ENST00000391855 HIST2H2AA3Q6FI13 130 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms