RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 PET117Q6UWS5 81 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 BTNL8Q6UX41 500 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 TMEM182Q6ZP80 229 aaPredicted RBP2.55□□□□□ -2
RNU6-550P-201ENST00000391057 GPRIN3Q6ZVF9 776 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 SPATA19Q7Z5L4 167 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 ZFAND4Q86XD8 727 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 LYG1Q8N1E2 194 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 OR10G7Q8NGN6 311 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 RPLP0P6Q8NHW5 317 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 NCOA7Q8NI08 942 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 OCC1Q8TAD7 63 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 ST6GALNAC6Q969X2 333 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 NXPE2Q96DL1 559 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 GAL3ST4Q96RP7 486 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 IL12RB2Q99665 862 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 RPF1Q9H9Y2 349 aaKnown RBP2.55□□□□□ -2
RNU6-550P-201ENST00000391057 LMAN1LQ9HAT1 526 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 GPN1Q9HCN4 374 aaPredicted RBP2.55□□□□□ -2
RNU6-550P-201ENST00000391057 IARS2Q9NSE4 1012 aaKnown RBP2.55□□□□□ -2
RNU6-550P-201ENST00000391057 NLGN3Q9NZ94 848 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 BAIAP2L1Q9UHR4 511 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 KLK13Q9UKR3 277 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 POMT2Q9UKY4 750 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 NSG2Q9Y328 171 aa2.55□□□□□ -2
RNU6-550P-201ENST00000391057 RNF123Q5XPI4 1314 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 TRAV18A0A075B6X5 111 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 hCG_38984A0A1B0GV85 526 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 NKX6-3A6NJ46 265 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 EPM2AB3EWF7 344 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 NPIPA3F8WFD2 350 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 G3V2L1 256 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 RTCAO00442 366 aaKnown RBP2.54□□□□□ -2
RNU6-550P-201ENST00000391057 WDR46O15213 610 aaKnown RBP2.54□□□□□ -2
RNU6-550P-201ENST00000391057 MOCS2O96007 188 aaPredicted RBP2.54□□□□□ -2
RNU6-550P-201ENST00000391057 HPRP00739 348 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 EEF2P13639 858 aaKnown RBP2.54□□□□□ -2
RNU6-550P-201ENST00000391057 GATA1P15976 413 aaPredicted RBP2.54□□□□□ -2
RNU6-550P-201ENST00000391057 ACADSP16219 412 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 IFNAR1P17181 557 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 AOC1P19801 751 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 C4BPBP20851 252 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 PSMB4P28070 264 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 SHC1P29353 583 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 OXTRP30559 389 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 OR3A3P47888 321 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 PTENP60484 403 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 LMO4P61968 165 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 PAX8Q06710 450 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 LY6DQ14210 128 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 TWISTNBQ3B726 338 aaPredicted RBP2.54□□□□□ -2
RNU6-550P-201ENST00000391057 ZNF542PQ5EBM4 170 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 SPECC1Q5M775 1068 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 CAVIN1Q6NZI2 390 aaKnown RBP2.54□□□□□ -2
RNU6-550P-201ENST00000391057 ZNF343Q6P1L6 599 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 C3P1Q6ZMU1 363 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 VSIG1Q86XK7 387 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 C4orf19Q8IY42 314 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 SLC22A15Q8IZD6 547 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 OR52B6Q8NGF0 335 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 CHPT1Q8WUD6 406 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 CASP10Q92851 521 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 RIT1Q92963 219 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 EXOC4Q96A65 974 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 BSCL2Q96G97 398 aaPredicted RBP2.54□□□□□ -2
RNU6-550P-201ENST00000391057 ERO1AQ96HE7 468 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 INTS14Q96SY0 518 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 ALKBH7Q9BT30 221 aaPredicted RBP2.54□□□□□ -2
RNU6-550P-201ENST00000391057 NACAP1Q9BZK3 213 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 DPEP2Q9H4A9 486 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 C10orf88Q9H8K7 445 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 RAB9BQ9NP90 201 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 POMT1Q9Y6A1 747 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 ARID2Q68CP9 1835 aa2.54□□□□□ -2
RNU6-550P-201ENST00000391057 COL2A1P02458 1487 aaPredicted RBP2.53□□□□□ -2
RNU6-550P-201ENST00000391057 IGHV4-30-2A0A087WSY4 118 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 C5orf52A6NGY3 159 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 A8MXK9 166 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 PGRMC2O15173 223 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 MAGEB2O15479 319 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 TLX2O43763 284 aaPredicted RBP2.53□□□□□ -2
RNU6-550P-201ENST00000391057 KIF5CO60282 957 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 MTRF1O75570 445 aaKnown RBP2.53□□□□□ -2
RNU6-550P-201ENST00000391057 NXPH4O95158 308 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 SIX3O95343 332 aaPredicted RBP2.53□□□□□ -2
RNU6-550P-201ENST00000391057 RPLP0P05388 317 aaKnown RBP2.53□□□□□ -2
RNU6-550P-201ENST00000391057 GIFP27352 417 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 TLX1P31314 330 aaPredicted RBP2.53□□□□□ -2
RNU6-550P-201ENST00000391057 TIA1P31483 386 aaKnown RBP eCLIP2.53□□□□□ -2
RNU6-550P-201ENST00000391057 GPR183P32249 361 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 CAPGP40121 348 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 KRTAP10-5P60370 271 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 SCN1BQ07699 218 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 PPA1Q15181 289 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 MS4A18Q3C1V0 323 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 COX8CQ7Z4L0 72 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 P2RY8Q86VZ1 359 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 FAM131BQ86XD5 332 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 Q8N377 158 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 CCDC185Q8N715 623 aa2.53□□□□□ -2
RNU6-550P-201ENST00000391057 OR9Q2Q8NGE9 314 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms