RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 BADQ92934 168 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 SKA1Q96BD8 255 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 NSUN4Q96CB9 384 aaKnown RBP1□□□□□ -2.25
SNORD28B-201ENST00000390993 ZNF830Q96NB3 372 aaPredicted RBP1□□□□□ -2.25
SNORD28B-201ENST00000390993 DGAT2Q96PD7 388 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 KLHL5Q96PQ7 755 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 FEVQ99581 238 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 CPNE1Q99829 537 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 CCDC3Q9BQI4 270 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 CHCHD6Q9BRQ6 235 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 YTHDF1Q9BYJ9 559 aaKnown RBP1□□□□□ -2.25
SNORD28B-201ENST00000390993 SLITRK2Q9H156 845 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 CCDC68Q9H2F9 335 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 RIMS4Q9H426 269 aaPredicted RBP1□□□□□ -2.25
SNORD28B-201ENST00000390993 GOLPH3LQ9H4A5 285 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 EGLN3Q9H6Z9 239 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 Q9H8V8 135 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 MYNNQ9NPC7 610 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 UBE2TQ9NPD8 197 aaPredicted RBP1□□□□□ -2.25
SNORD28B-201ENST00000390993 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1□□□□□ -2.25
SNORD28B-201ENST00000390993 STAU2Q9NUL3 570 aaKnown RBP eCLIP1□□□□□ -2.25
SNORD28B-201ENST00000390993 NSMCE4AQ9NXX6 385 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 CLEC5AQ9NY25 188 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 HAO2Q9NYQ3 351 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 SENP1Q9P0U3 644 aa1□□□□□ -2.25
SNORD28B-201ENST00000390993 ADD3Q9UEY8 706 aaKnown RBP1□□□□□ -2.25
SNORD28B-201ENST00000390993 IGHV3-20A0A0C4DH32 117 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 C2orf92A0A1B0GVN3 265 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 SYNDIG1LA6NDD5 238 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 CASTOR2A6NHX0 329 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 AGAP14A8MT82 685 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 ARHGEF33A8MVX0 844 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 TRIM77I1YAP6 450 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 TNFSF11O14788 317 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 TXNL1O43396 289 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 SCO2O43819 266 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 DOK2O60496 412 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 SAP30O75446 220 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 ATP5BP06576 529 aaKnown RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 CSN3P07498 182 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 UMPSP11172 480 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 GOT1P17174 413 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 NNMTP40261 264 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 SLC1A4P43007 532 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 OR3A3P47888 321 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 FNTAP49354 379 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 RAB28P51157 221 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 CLDN17P56750 224 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 KRTAP10-8P60410 259 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 TRA2BP62995 288 aaKnown RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 RASGEF1BQ0VAM2 473 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 RALGDSQ12967 914 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 PRPF4BQ13523 1007 aaKnown RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 TRA2AQ13595 282 aaKnown RBP eCLIP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 FASTKQ14296 549 aaKnown RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 PPA1Q15181 289 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 TMEM44Q2T9K0 475 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 CNPY1Q3B7I2 92 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 TIMM50Q3ZCQ8 353 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 C2orf83Q53S99 150 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 VWA2Q5GFL6 755 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 DDX59Q5T1V6 619 aaKnown RBP eCLIP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 SPOUT1Q5T280 376 aaKnown RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 C9orf66Q5T8R8 295 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 REP15Q6BDI9 236 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 GPR139Q6DWJ6 353 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 NAA16Q6N069 864 aaPredicted RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 REG3GQ6UW15 175 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 Q71RC1 249 aaPredicted RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 MCM10Q7L590 875 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 CENPVQ7Z7K6 275 aaPredicted RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 PRUNE1Q86TP1 453 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 TLK2Q86UE8 772 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 ZNF595Q8IYB9 648 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 SLC4A11Q8NBS3 891 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 OR4Q3Q8NH05 313 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 SEPT1Q8WYJ6 367 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 PYCR2Q96C36 320 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 HDAC11Q96DB2 347 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 LURAP1Q96LR2 239 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 MAGEB18Q96M61 343 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 AK8Q96MA6 479 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 CFAP57Q96MR6 1250 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 FAM218AQ96MZ4 157 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 GCNAQ96QF7 691 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 TAAR6Q96RI8 345 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 MAPKAP1Q9BPZ7 522 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 PAPOLGQ9BWT3 736 aaKnown RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 GTPBP2Q9BX10 602 aaKnown RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 GHITMQ9H3K2 345 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 FN3KQ9H479 309 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 CNOT10Q9H9A5 744 aaKnown RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 PDRG1Q9NUG6 133 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 PRMT7Q9NVM4 692 aaPredicted RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 CRNNQ9UBG3 495 aaPredicted RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 DBF4Q9UBU7 674 aaPredicted RBP0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 MORF4L1Q9UBU8 362 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 RPS6KA6Q9UK32 745 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 PILRBQ9UKJ0 227 aa0.99□□□□□ -2.25
SNORD28B-201ENST00000390993 IKZF3Q9UKT9 509 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms