RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 MS4A12Q9NXJ0 267 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 DUSP11O75319 330 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 PNPLA4P41247 253 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 IDH2P48735 452 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 ETV1P50549 477 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 RHAGQ02094 409 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 ACVR1Q04771 509 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 DBPQ10586 325 aaPredicted RBP14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 MRPL28Q13084 256 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 POU4F3Q15319 338 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 PYDC2Q56P42 97 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 XKR4Q5GH76 650 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 LRIF1Q5T3J3 769 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 LCN1P1Q5VSP4 162 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 SHEQ5VZ18 495 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 RAET1EQ8TD07 263 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 OPALINQ96PE5 141 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 MCOLN1Q9GZU1 580 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 SIK2Q9H0K1 926 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 SERHLQ9NQF3 203 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 FAM105AQ9NUU6 356 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 CLCA3PQ9Y6N3 262 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 ESR1P03372 595 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 CYP17A1P05093 508 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 TSPAN19P0C672 248 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 FAM157BP0CG42 384 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 CCR1P32246 355 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 CD86P42081 329 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 MRPS6P82932 125 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 BAMBIQ13145 260 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 IQCCQ4KMZ1 466 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 SIRPB2Q5JXA9 342 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 ZNF648Q5T619 568 aaPredicted RBP14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 ZNF296Q8WUU4 475 aaPredicted RBP14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 PCED1BQ96HM7 432 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 DIRAS2Q96HU8 199 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 PPA2Q9H2U2 334 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 RBFOX1Q9NWB1 397 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 OSER1Q9NX31 292 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 TAS2R13Q9NYV9 303 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 SRRDQ9UH36 339 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 SCML1Q9UN30 329 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 ZNF623O75123 536 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 PTPN6P29350 595 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 SSTR4P31391 388 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 GDPGP1Q6ZNW5 385 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 GPAT4Q86UL3 456 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 LIX1Q8N485 282 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 MSLNLQ96KJ4 702 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 INPP5KQ9BT40 448 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 GALNT9Q9HCQ5 603 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 CD274Q9NZQ7 290 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 A0A1W2PQL4 384 aaPredicted RBP14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 ARL5CA6NH57 179 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 ZNF670-ZNF695F2Z2N8 137 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 M0QZ92 97 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 SEPT4O43236 478 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 PRSS56P0CW18 603 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 HOXB9P17482 250 aaPredicted RBP14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 CRYBB2P43320 205 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 MAN2A2P49641 1150 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 STC1P52823 247 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 RAB25P57735 213 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 CSTF3Q12996 717 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 DMC1Q14565 340 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 SLC39A12Q504Y0 691 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 ANKRD54Q6NXT1 300 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 C16orf62Q7Z3J2 963 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 GPSM1Q86YR5 675 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 FAM217AQ8IXS0 508 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 OR4F6Q8NGB9 312 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 DNAJB8Q8NHS0 232 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 CREB3L4Q8TEY5 395 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 MARC2Q969Z3 335 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 HSH2DQ96JZ2 352 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 EPYCQ99645 322 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 SMOQ99835 787 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 KATNAL1Q9BW62 490 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 KCNH6Q9H252 994 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 HEXA-AS1Q9H8Q6 139 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 ZC4H2Q9NQZ6 224 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 NDRG2Q9UN36 371 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 PCDHGA2Q9Y5H1 932 aa14.14□□□□□ -0.15
VPS9D1-201ENST00000389386 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 RPS10-NUDT3A0A1W2PQS6 291 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 PITPNM1O00562 1244 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 OR7A17O14581 309 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 IFNA16P05015 189 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 SCG5P05408 212 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 MMP2P08253 660 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 ARSBP15848 533 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 WARSP23381 471 aaKnown RBP14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 CD52P31358 61 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 CLDN20P56880 219 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 MAXP61244 160 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 WSCD2Q2TBF2 565 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 TTLL9Q3SXZ7 439 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 FLYWCH1Q4VC44 716 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 METTL2BQ6P1Q9 378 aaKnown RBP14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 TMEM81Q6P7N7 255 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms