RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 GAB1Q13480 694 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 SIM2Q14190 667 aaPredicted RBP14.38□□□□□ -0.11
SCFD2-201ENST00000388940 ELOAQ14241 798 aaKnown RBP14.38□□□□□ -0.11
SCFD2-201ENST00000388940 PAGE2BQ5JRK9 111 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 Q6ZNX1 250 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 SLC16A12Q6ZSM3 486 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 LRRC56Q8IYG6 542 aaPredicted RBP14.38□□□□□ -0.11
SCFD2-201ENST00000388940 C11orf65Q8NCR3 313 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 TMIEQ8NEW7 156 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 OR9A1PQ8NGU1 263 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 SP7Q8TDD2 431 aaPredicted RBP14.38□□□□□ -0.11
SCFD2-201ENST00000388940 DOHHQ9BU89 302 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 PALMDQ9NP74 551 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 ITM2CQ9NQX7 267 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 TBC1D23Q9NUY8 699 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 EXD2Q9NVH0 621 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 ATAD3AQ9NVI7 634 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 SCN3BQ9NY72 215 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 ITM2BQ9Y287 266 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 TSC22D4Q9Y3Q8 395 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 NUP210Q8TEM1 1887 aaPredicted RBP14.38□□□□□ -0.11
SCFD2-201ENST00000388940 TMEM221A6NGB7 291 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 TMEM229AB2RXF0 380 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 KPNA3O00505 521 aaPredicted RBP14.38□□□□□ -0.11
SCFD2-201ENST00000388940 FOXD2O60548 495 aaPredicted RBP14.38□□□□□ -0.11
SCFD2-201ENST00000388940 DIRAS1O95057 198 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 ADH5P11766 374 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 ITGB7P26010 798 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 ELP6Q0PNE2 266 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 PDE7AQ13946 482 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 LAPTM4AQ15012 233 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 HIST2H2ACQ16777 129 aaPredicted RBP14.38□□□□□ -0.11
SCFD2-201ENST00000388940 KIAA1614Q5VZ46 1190 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 HIST2H2AA3Q6FI13 130 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 XKR5Q6UX68 686 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 SYTL1Q8IYJ3 562 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 CFAP206Q8IYR0 622 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 GPR156Q8NFN8 814 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 OR4A15Q8NGL6 344 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 SPPL3Q8TCT6 385 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 POF1BQ8WVV4 589 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 FAR1Q8WVX9 515 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 HSPBAP1Q96EW2 488 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 ZNF514Q96K75 400 aaPredicted RBP14.38□□□□□ -0.11
SCFD2-201ENST00000388940 WRAP53Q9BUR4 548 aaKnown RBP14.38□□□□□ -0.11
SCFD2-201ENST00000388940 RAD21L1Q9H4I0 556 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 KRT84Q9NSB2 600 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 THUMPD1Q9NXG2 353 aaKnown RBP14.38□□□□□ -0.11
SCFD2-201ENST00000388940 SH3BP4Q9P0V3 963 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 WARS2Q9UGM6 360 aaKnown RBP14.38□□□□□ -0.11
SCFD2-201ENST00000388940 PCDHGB3Q9Y5G1 929 aa14.38□□□□□ -0.11
SCFD2-201ENST00000388940 XPNPEP2O43895 674 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 BCAS1O75363 584 aaPredicted RBP14.37□□□□□ -0.11
SCFD2-201ENST00000388940 GCM2O75603 506 aaPredicted RBP14.37□□□□□ -0.11
SCFD2-201ENST00000388940 CLPXO76031 633 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 INMTO95050 263 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 EFNA1P20827 205 aaPredicted RBP14.37□□□□□ -0.11
SCFD2-201ENST00000388940 MVDP53602 400 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 SELENOWP63302 87 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 DPTQ07507 201 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 CATSPEREQ5SY80 951 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 CRTC3Q6UUV7 619 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 NAGSQ8N159 534 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 CELF5Q8N6W0 485 aaKnown RBP14.37□□□□□ -0.11
SCFD2-201ENST00000388940 ZNF366Q8N895 744 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 SMYD1Q8NB12 490 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 SETD7Q8WTS6 366 aaKnown RBP14.37□□□□□ -0.11
SCFD2-201ENST00000388940 MTERF3Q96E29 417 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 PAWRQ96IZ0 340 aaKnown RBP14.37□□□□□ -0.11
SCFD2-201ENST00000388940 SAMD11Q96NU1 681 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 DGCR6LQ9BY27 220 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 TRIM39Q9HCM9 518 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 CCNB1IP1Q9NPC3 277 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 MYNNQ9NPC7 610 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 DMRT3Q9NQL9 472 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 PCDHGA10Q9Y5H3 936 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 DENND4AQ7Z401 1863 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 TNFRSF21O75509 655 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 PAPLNO95428 1278 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 CEBPBP17676 345 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 CD6P30203 668 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 MAPK10P53779 464 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 RBBP4Q09028 425 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 SLBPQ14493 270 aaKnown RBP eCLIP14.37□□□□□ -0.11
SCFD2-201ENST00000388940 MAD2L1BPQ15013 274 aaPredicted RBP14.37□□□□□ -0.11
SCFD2-201ENST00000388940 NPTX1Q15818 432 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 ZNF385BQ569K4 471 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.37□□□□□ -0.11
SCFD2-201ENST00000388940 ARMCX6Q7L4S7 300 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 COMMD6Q7Z4G1 85 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 GRASPQ7Z6J2 395 aaPredicted RBP14.37□□□□□ -0.11
SCFD2-201ENST00000388940 C17orf50Q8WW18 174 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 NUS1Q96E22 293 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 TPD52L3Q96J77 140 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 LRRC3BQ96PB8 259 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 DPEP2Q9H4A9 486 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 TBCCD1Q9NVR7 557 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 KIF17Q9P2E2 1029 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 ERVK-18Q9QC07 812 aa14.37□□□□□ -0.11
SCFD2-201ENST00000388940 GPR34Q9UPC5 381 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms