RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 NPIPA2E9PIF3 369 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 NPIPA3F8WFD2 350 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 WNT10BO00744 389 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 AHSA1O95433 338 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 GKN3PP0CG01 181 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 MATN1P21941 496 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 RPL35P42766 123 aaKnown RBP5.7□□□□□ -1.5
RFX3-204ENST00000382004 HMGCS1Q01581 520 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 ZNF674Q2M3X9 581 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 NUDT13Q86X67 352 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 PSMG2Q969U7 264 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 DNTTIP1Q9H147 329 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 SLC25A51Q9H1U9 297 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 SYT4Q9H2B2 425 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 MED14O60244 1454 aa5.7□□□□□ -1.5
RFX3-204ENST00000382004 ARPC4-TTLL3A0A0A6YYG9 625 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 FAM237AA0A1B0GTK4 181 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 FSCN2O14926 492 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 AGR2O95994 175 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 GSTM3P21266 225 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 EDNRBP24530 442 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 DGKGP49619 791 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 TMBIM6P55061 237 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 PCBP1Q15365 356 aaKnown RBP eCLIP5.69□□□□□ -1.5
RFX3-204ENST00000382004 DCST2Q5T1A1 773 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 GPR142Q7Z601 462 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 PYROXD2Q8N2H3 581 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 LRRC52Q8N7C0 313 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 OR13C3Q8NGS6 347 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 TMEM80Q96HE8 168 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 C7orf26Q96N11 449 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 CPXM1Q96SM3 734 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 TSSK6Q9BXA6 273 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 RAB11FIP5Q9BXF6 653 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 VPS29Q9UBQ0 182 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 STMND1H3BQB6 276 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 LDB2O43679 373 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 NPHS1O60500 1241 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 APOC3P02656 99 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 SRPRAP08240 638 aaKnown RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 GRM5P41594 1212 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 ALDH3B2P48448 385 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 CAMLGP49069 296 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 RNF4P78317 190 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 PRAMEF14Q5SWL7 426 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 PRAMEF13Q5VWM6 474 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 CRTC1Q6UUV9 634 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 FITM2Q8N6M3 262 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 FAM84AQ96KN4 292 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 MYRFLQ96LU7 910 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 LRRC3Q9BY71 257 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 DHX33Q9H6R0 707 aaKnown RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 MRPL15Q9P015 296 aaKnown RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 IL36AQ9UHA7 158 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 ATXN7L1Q9ULK2 861 aaPredicted RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 POMPQ9Y244 141 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 DNMT3AQ9Y6K1 912 aaPredicted RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 OR6C74A6NCV1 312 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 C12orf71A8MTZ7 269 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 POLR1CO15160 346 aaPredicted RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 FKTNO75072 461 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 PIM1P11309 404 aaPredicted RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 ERP29P30040 261 aaKnown RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 PTGER3P43115 390 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 IRF9Q00978 393 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 TAF1AQ15573 450 aaPredicted RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 VSTM1Q6UX27 236 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 TMCO2Q7Z6W1 182 aaPredicted RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 C12orf40Q86WS4 652 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 METTL27Q8N6F8 245 aaPredicted RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 FANK1Q8TC84 345 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 SLC22A17Q8WUG5 538 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 TMBIM1Q969X1 311 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 SLC22A18Q96BI1 424 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 NEDD4LQ96PU5 975 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 Q9N2J8 555 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 SERTAD4Q9NUC0 356 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 PTBP2Q9UKA9 531 aaKnown RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 UBE2J1Q9Y385 318 aaPredicted RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 A2ML1A8K2U0 1454 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 FAM227AF5H4B4 570 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 GRID2O43424 1007 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 MT-ND5P03915 603 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 H2BFMP0C1H6 154 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 ADH6P28332 368 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 PTPN6P29350 595 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 PTGR1Q14914 329 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 NFATC4Q14934 902 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 INAVAQ3KP66 663 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 OR4F3Q6IEY1 312 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 PLD5Q8N7P1 536 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 ACBD4Q8NC06 268 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 OR4D6Q8NGJ1 314 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 RADILQ96JH8 1075 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 COPZ2Q9P299 210 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 CPQQ9Y646 472 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 IQSEC2Q5JU85 1478 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 M0QX08 132 aa5.69□□□□□ -1.5
RFX3-204ENST00000382004 CASC3O15234 703 aaKnown RBP5.69□□□□□ -1.5
RFX3-204ENST00000382004 EEF1E1O43324 174 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms