RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 TMEM214Q6NUQ4 689 aaKnown RBP16.21■□□□□ 0.19
HMGN1-203ENST00000380748 ACRBPQ8NEB7 543 aa16.21■□□□□ 0.19
HMGN1-203ENST00000380748 PRAP1Q96NZ9 151 aa16.21■□□□□ 0.19
HMGN1-203ENST00000380748 TTYH2Q9BSA4 534 aa16.21■□□□□ 0.19
HMGN1-203ENST00000380748 ABHD10Q9NUJ1 306 aa16.21■□□□□ 0.19
HMGN1-203ENST00000380748 Q9UFV3 132 aa16.21■□□□□ 0.19
HMGN1-203ENST00000380748 TFR2Q9UP52 801 aa16.21■□□□□ 0.19
HMGN1-203ENST00000380748 FAM215AQ9Y5M1 114 aa16.21■□□□□ 0.19
HMGN1-203ENST00000380748 TLN2Q9Y4G6 2542 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 ZNF860A6NHJ4 632 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 SLC16A8O95907 504 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 GAS8O95995 478 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 HEXAP06865 529 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 GLI4P10075 376 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 ACVR2AP27037 513 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 CTNNA1P35221 906 aaKnown RBP16.2■□□□□ 0.18
HMGN1-203ENST00000380748 ZFP36L2P47974 494 aaKnown RBP16.2■□□□□ 0.18
HMGN1-203ENST00000380748 EIF3BP55884 814 aaKnown RBP16.2■□□□□ 0.18
HMGN1-203ENST00000380748 ABATP80404 500 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 TYSND1Q2T9J0 566 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 DEFB113Q30KQ7 82 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 MDGA2Q7Z553 956 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 OR5T3Q8NGG3 340 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 ZNF480Q8WV37 535 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 NUDT8Q8WV74 236 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 GBP4Q96PP9 640 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 ANKHQ9HCJ1 492 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 DMRT3Q9NQL9 472 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 TCAF1Q9Y4C2 921 aa16.2■□□□□ 0.18
HMGN1-203ENST00000380748 A6NNC1 897 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 FAM166BA8MTA8 275 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 E7ENX8 843 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 FCHO1O14526 889 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 CD3EAPO15446 510 aaKnown RBP16.19■□□□□ 0.18
HMGN1-203ENST00000380748 NIPSNAP2O75323 286 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 PSIP1O75475 530 aaKnown RBP16.19■□□□□ 0.18
HMGN1-203ENST00000380748 ZNF189O75820 626 aaPredicted RBP16.19■□□□□ 0.18
HMGN1-203ENST00000380748 ATE1O95260 518 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 RAF1P04049 648 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 RPS3P23396 243 aaKnown RBP eCLIP16.19■□□□□ 0.181e-8■□□□□ 8.7
HMGN1-203ENST00000380748 ATP5DP30049 168 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 HOXC12P31275 282 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 ADH7P40394 386 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 MPP1Q00013 466 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 TAP2Q03519 686 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 RTL6Q6ICC9 239 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 ZNF585AQ6P3V2 769 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 LRRC6Q86X45 466 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 CYP4X1Q8N118 509 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 CYP4Z2PQ8N1L4 340 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 KCT2Q8NC54 265 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 OR1F2PQ96R84 312 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 EBNA1BP2Q99848 306 aaKnown RBP16.19■□□□□ 0.18
HMGN1-203ENST00000380748 DEPPQ9NTK1 212 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 NAALAD2Q9Y3Q0 740 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 PCDHA3Q9Y5H8 950 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 DUSP10Q9Y6W6 482 aa16.19■□□□□ 0.18
HMGN1-203ENST00000380748 PINLYPA6NC86 204 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 KIF5CO60282 957 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 NDUFS3O75489 264 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 TJP3O95049 919 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 KCNJ11Q14654 390 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 ACSBG2Q5FVE4 666 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 THEMIS2Q5TEJ8 643 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 PPP1R21Q6ZMI0 780 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 CXXC5Q7LFL8 322 aaKnown RBP16.18■□□□□ 0.18
HMGN1-203ENST00000380748 WDR53Q7Z5U6 358 aaPredicted RBP16.18■□□□□ 0.18
HMGN1-203ENST00000380748 KRTAP1-3Q8IUG1 177 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 BIRC8Q96P09 236 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 FAM114A2Q9NRY5 505 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 GALPQ9UBC7 116 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 CBLCQ9ULV8 474 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 GTF3C3Q9Y5Q9 886 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 ZANQ9Y493 2812 aa16.18■□□□□ 0.18
HMGN1-203ENST00000380748 FEZF1A0PJY2 475 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 SAGE2PA6NJ88 616 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 FIGNL2A6NMB9 653 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 ZNF839A8K0R7 811 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 SLC16A5O15375 505 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 MFAP3LO75121 409 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 DNAJB6O75190 326 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 CATP04040 527 aaKnown RBP16.17■□□□□ 0.18
HMGN1-203ENST00000380748 HSD17B2P37059 387 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 RPS15AP62244 130 aaKnown RBP16.17■□□□□ 0.18
HMGN1-203ENST00000380748 PPIAP62937 165 aaKnown RBP16.17■□□□□ 0.18
HMGN1-203ENST00000380748 TRIM14Q14142 442 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 KLHL38Q2WGJ6 581 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 SLC25A35Q3KQZ1 300 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 PAOXQ6QHF9 649 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 B3GNT6Q6ZMB0 384 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 SPNS2Q8IVW8 549 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 LRRC56Q8IYG6 542 aaPredicted RBP16.17■□□□□ 0.18
HMGN1-203ENST00000380748 ARMC10Q8N2F6 343 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 SPATA3Q8NHX4 192 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 ALG3Q92685 438 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 SLCO2A1Q92959 643 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 DEFB126Q9BYW3 111 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 CHRAC1Q9NRG0 131 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 LIPGQ9Y5X9 500 aa16.17■□□□□ 0.18
HMGN1-203ENST00000380748 KCNE1BA0A087WTH5 132 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms