RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 CIDECQ96AQ7 238 aaPredicted RBP8.4□□□□□ -1.06
TRIM6-203ENST00000380107 PITX2Q99697 317 aa8.4□□□□□ -1.06
TRIM6-203ENST00000380107 BCL7BQ9BQE9 202 aa8.4□□□□□ -1.06
TRIM6-203ENST00000380107 CLSTN3Q9BQT9 956 aa8.4□□□□□ -1.06
TRIM6-203ENST00000380107 SLC12A9Q9BXP2 914 aa8.4□□□□□ -1.06
TRIM6-203ENST00000380107 MMP27Q9H306 513 aa8.4□□□□□ -1.06
TRIM6-203ENST00000380107 RERGLQ9H628 205 aa8.4□□□□□ -1.06
TRIM6-203ENST00000380107 SPASTQ9UBP0 616 aa8.4□□□□□ -1.06
TRIM6-203ENST00000380107 SCN5AQ14524 2016 aa8.4□□□□□ -1.06
TRIM6-203ENST00000380107 TMEM88BA6NKF7 163 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 H7C4K7 107 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 MYCP01106 439 aaPredicted RBP8.4□□□□□ -1.07
TRIM6-203ENST00000380107 RPLP0P05388 317 aaKnown RBP8.4□□□□□ -1.07
TRIM6-203ENST00000380107 IGFBP1P08833 259 aaPredicted RBP8.4□□□□□ -1.07
TRIM6-203ENST00000380107 ANXA4P09525 319 aaPredicted RBP8.4□□□□□ -1.07
TRIM6-203ENST00000380107 AZGP1P25311 298 aaKnown RBP8.4□□□□□ -1.07
TRIM6-203ENST00000380107 PBLDP30039 288 aaPredicted RBP8.4□□□□□ -1.07
TRIM6-203ENST00000380107 S100A5P33763 92 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 GGT2P36268 569 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 TRPC1P48995 793 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 COPZ1P61923 177 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 RAE1P78406 368 aaKnown RBP8.4□□□□□ -1.07
TRIM6-203ENST00000380107 SMARCB1Q12824 385 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 TSTQ16762 297 aaKnown RBP8.4□□□□□ -1.07
TRIM6-203ENST00000380107 LEXMQ3ZCV2 418 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.4□□□□□ -1.07
TRIM6-203ENST00000380107 CPTPQ5TA50 214 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 GPR155Q7Z3F1 870 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 BBS7Q8IWZ6 715 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 MMP21Q8N119 569 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 DCAF4L2Q8NA75 395 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 B3GNT7Q8NFL0 401 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 DNAJB8Q8NHS0 232 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 NFKBIDQ8NI38 313 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 VANGL1Q8TAA9 524 aaPredicted RBP8.4□□□□□ -1.07
TRIM6-203ENST00000380107 CSGALNACT1Q8TDX6 532 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 VOPP1Q96AW1 172 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 HHIPQ96QV1 700 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 IL4I1Q96RQ9 567 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 C2orf49Q9BVC5 232 aaPredicted RBP8.4□□□□□ -1.07
TRIM6-203ENST00000380107 TP63Q9H3D4 680 aaPredicted RBP8.4□□□□□ -1.07
TRIM6-203ENST00000380107 SGK2Q9HBY8 427 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 ZNF334Q9HCZ1 680 aaPredicted RBP8.4□□□□□ -1.07
TRIM6-203ENST00000380107 MAP4K5Q9Y4K4 846 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 YIPF1Q9Y548 306 aa8.4□□□□□ -1.07
TRIM6-203ENST00000380107 CHD7Q9P2D1 2997 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 KMOO15229 486 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 ASNA1O43681 348 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 KIAA0513O60268 411 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 OR56A5P0C7T3 313 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 CKMT1AP12532 417 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 JUPP14923 745 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 SERPINA4P29622 427 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 CASP3P42574 277 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 BDKRB1P46663 353 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 TUFMP49411 452 aaKnown RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 RGS6P49758 472 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 HBA1P69905 142 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 MEF2AQ02078 507 aaPredicted RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 SRSF11Q05519 484 aaKnown RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 BCL2A1Q16548 175 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 GPR33Q49SQ1 333 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 ZMAT1Q5H9K5 638 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 DEPDC1Q5TB30 811 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 NXNL2Q5VZ03 156 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 RETSATQ6NUM9 610 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 CHRDL2Q6WN34 429 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 USP43Q70EL4 1123 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 BCDIN3DQ7Z5W3 292 aaKnown RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 DNAJB7Q7Z6W7 309 aaPredicted RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 ZNF605Q86T29 641 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 THOC6Q86W42 341 aaKnown RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 GATAD2AQ86YP4 633 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 GALNT13Q8IUC8 556 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 ELMOD1Q8N336 334 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 KIAA1958Q8N8K9 716 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 HJURPQ8NCD3 748 aaPredicted RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 CHST14Q8NCH0 376 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 TBC1D20Q96BZ9 403 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 SCLYQ96I15 445 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 NEDD4LQ96PU5 975 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 OR4K3Q96R72 315 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 TSEN34Q9BSV6 310 aaKnown RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 DOHHQ9BU89 302 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 BRD9Q9H8M2 597 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 EXOSC4Q9NPD3 245 aaKnown RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 ADPRHL2Q9NX46 363 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 IMPAD1Q9NX62 359 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 DUSP12Q9UNI6 340 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 IFT52Q9Y366 437 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 PCDHGB3Q9Y5G1 929 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 CFAP20Q9Y6A4 193 aaKnown RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 MYO10Q9HD67 2058 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 C1orf226A1L170 272 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 SMIM30A4D0T7 59 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 MANSC4A6NHS7 340 aaPredicted RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 WWP2O00308 870 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 PRRG1O14668 218 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 SCAMP2O15127 329 aaKnown RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 RGS5O15539 181 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms