RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 PCDH8O95206 1070 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 PDGFBP01127 241 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-202ENST00000379996 FTH1P02794 183 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 TBC1D3HP0C7X1 549 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 MPC1LP0DKB6 136 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 RAP2AP10114 183 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 KELP23276 732 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 GGT5P36269 586 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 PIGAP37287 484 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 GPR1P46091 355 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 IL2P60568 153 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 RPA4Q13156 261 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 NFATC4Q14934 902 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 RUNDC3AQ59EK9 446 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 CCNYL2Q5T2Q4 361 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 TBC1D3GQ6DHY5 549 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 TBC1D3CQ6IPX1 549 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 ANKRD26P1Q6NSI1 321 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 SUSD1Q6UWL2 747 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 XKR5Q6UX68 686 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 GPSM1Q86YR5 675 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 TBC1D3Q8IZP1 549 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-202ENST00000379996 PAF1Q8N7H5 531 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 FLCNQ8NFG4 579 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 SCAMP4Q969E2 229 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 TIMM29Q9BSF4 260 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 APOOQ9BUR5 198 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 WDR26Q9H7D7 661 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 RDH14Q9HBH5 336 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 CD93Q9NPY3 652 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 PHPT1Q9NRX4 125 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-202ENST00000379996 SPATA6Q9NWH7 488 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-202ENST00000379996 TMEM9Q9P0T7 183 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 AURKCQ9UQB9 309 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 PCDHGA2Q9Y5H1 932 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 A0A1W2PR77 199 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 RAD51BO15315 384 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 LAMTOR5O43504 91 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 CAPN1P07384 714 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 OR56A5P0C7T3 313 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 CD33P20138 364 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 GTF2H2Q13888 395 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 CDKL4Q5MAI5 379 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 GTF2H2CQ6P1K8 395 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 SCIMPQ6UWF3 145 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 ENPP6Q6UWR7 440 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 PGBD3Q8N328 593 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 SDR16C5Q8N3Y7 309 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 PLA2G15Q8NCC3 412 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 LZICQ8WZA0 190 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 SGCDQ92629 289 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 TMBIM1Q969X1 311 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 SIGLEC11Q96RL6 698 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 CPPED1Q9BRF8 314 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-202ENST00000379996 BOCQ9BWV1 1114 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 CLPBQ9H078 707 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 C6orf106Q9H6K1 298 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-202ENST00000379996 GPN2Q9H9Y4 310 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-202ENST00000379996 MBNL1Q9NR56 388 aaKnown RBP7.44□□□□□ -1.22
CDKL5-202ENST00000379996 CYP8B1Q9UNU6 501 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 COQ6Q9Y2Z9 468 aa7.44□□□□□ -1.22
CDKL5-202ENST00000379996 MAGED1Q9Y5V3 778 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-202ENST00000379996 NCF1BA6NI72 391 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-202ENST00000379996 NCF1CA8MVU1 366 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-202ENST00000379996 SLC16A5O15375 505 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 DFNA5O60443 496 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 NCF1P14598 390 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-202ENST00000379996 AOAHP28039 575 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 ELK4P28324 431 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 MTPNP58546 118 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 GABARAPL2P60520 117 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 TMEM115Q12893 351 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-202ENST00000379996 PRKG2Q13237 762 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 DAG1Q14118 895 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 IQCCQ4KMZ1 466 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 LAIR1Q6GTX8 287 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 RAET1GQ6H3X3 334 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 KRT80Q6KB66 452 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 FKBP9P1Q75LS8 142 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 GPR141Q7Z602 305 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 C11orf96Q7Z7L8 435 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 CDYL2Q8N8U2 506 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 RASGEF1AQ8N9B8 481 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 FBXO15Q8NCQ5 510 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-202ENST00000379996 RNF217Q8TC41 542 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 GANCQ8TET4 914 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 C11orf24Q96F05 449 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-202ENST00000379996 BMFQ96LC9 184 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 MUS81Q96NY9 551 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 KAT8Q9H7Z6 458 aaKnown RBP7.43□□□□□ -1.22
CDKL5-202ENST00000379996 ERVMER34-1Q9H9K5 563 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 CXorf21Q9HAI6 301 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 GALNT8Q9NY28 637 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 IFT80Q9P2H3 777 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-202ENST00000379996 TRPS1Q9UHF7 1281 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 CD84Q9UIB8 345 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 PCDHGB1Q9Y5G3 927 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 PCDH15Q96QU1 1955 aa7.43□□□□□ -1.22
CDKL5-202ENST00000379996 UBA6A0AVT1 1052 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-202ENST00000379996 A8MX80 341 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms