RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 KCTD6Q8NC69 237 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 TRAPPC12Q8WVT3 735 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 EXOSC8Q96B26 276 aaKnown RBP7.23□□□□□ -1.25
CDKL5-201ENST00000379989 NSMCE2Q96MF7 247 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 TRMOQ9BU70 441 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 BTBD1Q9H0C5 482 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 PIF1Q9H611 641 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 CARS2Q9HA77 564 aaKnown RBP7.23□□□□□ -1.25
CDKL5-201ENST00000379989 ATXN7L1Q9ULK2 861 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-201ENST00000379989 A0A0G2JPF8 293 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 SMIM28A0A1B0GU29 152 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 SLC35F4A4IF30 521 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 EFCAB10A6NFE3 127 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 HNRNPCL3B7ZW38 293 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 PSMD3O43242 534 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 PROM1O43490 865 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 CHP2O43745 196 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 TULP3O75386 442 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 CCNB2O95067 398 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 APOC3P02656 99 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 HRGP04196 525 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 MPOP05164 745 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 HNRNPCL4P0DMR1 293 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 TYMPP19971 482 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 EFNA1P20827 205 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-201ENST00000379989 ACADLP28330 430 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 MAP2K3P46734 347 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 LIMK2P53671 638 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 CSNK2BP67870 215 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 ALKBH1Q13686 389 aaKnown RBP7.23□□□□□ -1.25
CDKL5-201ENST00000379989 SERTAD2Q14140 314 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 TEAD4Q15561 434 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 MPEG1Q2M385 716 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 TSTD2Q5T7W7 516 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 FAM102AQ5T9C2 384 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-201ENST00000379989 PDE12Q6L8Q7 609 aaKnown RBP7.23□□□□□ -1.25
CDKL5-201ENST00000379989 KRT74Q7RTS7 529 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 IL17RCQ8NAC3 791 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 OR1M1Q8NGA1 313 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 ITFG1Q8TB96 612 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 ADAMTS19Q8TE59 1207 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 FCGR1BQ92637 280 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 CMTM3Q96MX0 182 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 TMEM74Q96NL1 305 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 CPNE1Q99829 537 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 RBCK1Q9BYM8 510 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 BARHL1Q9BZE3 327 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 CD244Q9BZW8 370 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 FBXL2Q9UKC9 423 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 ADAM28Q9UKQ2 775 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 PADI2Q9Y2J8 665 aa7.23□□□□□ -1.25
CDKL5-201ENST00000379989 A0A096LPI6 279 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 MOXD2PA6NHM9 499 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 TARM1B6A8C7 271 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 TMEM189-UBE2V1I3L0A0 370 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 TO15178 435 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 SIGLEC5O15389 551 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 VPS26AO75436 327 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 ATP6AP2O75787 350 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 RECQL4O94761 1208 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 FGF2P09038 288 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 FBP1P09467 338 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 CYP4B1P13584 511 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 HLA-EP13747 358 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 TPH1P17752 444 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 TPSB2P20231 275 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 C21orf33P30042 268 aaPredicted RBP7.22□□□□□ -1.25
CDKL5-201ENST00000379989 HNMTP50135 292 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 KCNQ1P51787 676 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 OR4D2P58180 307 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 RNF4P78317 190 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 SOX4Q06945 474 aaPredicted RBP7.22□□□□□ -1.25
CDKL5-201ENST00000379989 SIGLEC14Q08ET2 396 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 SCAPQ12770 1279 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 SIM2Q14190 667 aaPredicted RBP7.22□□□□□ -1.25
CDKL5-201ENST00000379989 FCN2Q15485 313 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 TPSAB1Q15661 275 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 GOLGA7BQ2TAP0 167 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 WSCD2Q2TBF2 565 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 RFX4Q33E94 735 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 UBXN11Q5T124 520 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 BHLHB9Q6PI77 547 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 CYHR1Q6ZMK1 362 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 USP53Q70EK8 1073 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 STRA8Q7Z7C7 330 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 DENND1CQ8IV53 801 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 FAM86B1Q8N7N1 296 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 SETD9Q8NE22 299 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 DUSP18Q8NEJ0 188 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 ARNTL2Q8WYA1 636 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 NT5C3BQ969T7 300 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 ZC3HAV1LQ96H79 300 aaKnown RBP7.22□□□□□ -1.25
CDKL5-201ENST00000379989 WDFY2Q96P53 400 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 RNF157Q96PX1 679 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 DUSP16Q9BY84 665 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 WNT5BQ9H1J7 359 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 EQTNQ9NQ60 294 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 MED9Q9NWA0 146 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 MIOSQ9NXC5 875 aa7.22□□□□□ -1.25
CDKL5-201ENST00000379989 NSMCE4AQ9NXX6 385 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms