RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CAPN5O15484 640 aaPredicted RBP13.19□□□□□ -0.3
GPC6-201ENST00000377047 AHCYL1O43865 530 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 AHSA1O95433 338 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 DNAJA1P31689 397 aaKnown RBP13.19□□□□□ -0.3
GPC6-201ENST00000377047 BMP8BP34820 402 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 E2F2Q14209 437 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 MORN1Q5T089 497 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 NIPAL1Q6NVV3 410 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 BMP8AQ7Z5Y6 402 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 YIPF7Q8N8F6 280 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 OR4K14Q8NGD5 310 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 THAP3Q8WTV1 239 aaPredicted RBP13.19□□□□□ -0.3
GPC6-201ENST00000377047 DDX1Q92499 740 aaKnown RBP13.19□□□□□ -0.3
GPC6-201ENST00000377047 HTRA1Q92743 480 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 UBAP1Q9NZ09 502 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 GRIP1Q9Y3R0 1128 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 ARFGEF2Q9Y6D5 1785 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 ARPC2O15144 300 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 CAPZA1P52907 286 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 C1orf94Q6P1W5 598 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 KCNJ9Q92806 393 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 MAU2Q9Y6X3 613 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 RCBTB2O95199 551 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 PITX1P78337 314 aaPredicted RBP13.18□□□□□ -0.3
GPC6-201ENST00000377047 NTHL1P78549 312 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 PLET1Q6UQ28 207 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 APCDD1Q8J025 514 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 C1orf216Q8TAB5 229 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 MYH2Q9UKX2 1941 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 PTNP21246 168 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 AZGP1P25311 298 aaKnown RBP13.18□□□□□ -0.3
GPC6-201ENST00000377047 SMYD5Q6GMV2 418 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 RNF130Q86XS8 419 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 NRROSQ86YC3 692 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 THEM6Q8WUY1 208 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 FAM3CQ92520 227 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 SGCDQ92629 289 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 FAM172BPA6NC97 362 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 PRKD3O94806 890 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 SYNGR4O95473 234 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 CH25HO95992 272 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 SYPP08247 313 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 LACTB2Q53H82 288 aaPredicted RBP13.18□□□□□ -0.3
GPC6-201ENST00000377047 SPATC1Q76KD6 591 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 ARMC10Q8N2F6 343 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 C10orf82Q8WW14 230 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 FRMD6Q96NE9 622 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 IL4I1Q96RQ9 567 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 WDR6Q9NNW5 1121 aaKnown RBP13.18□□□□□ -0.3
GPC6-201ENST00000377047 TAS2R7Q9NYW3 318 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 LRP6O75581 1613 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 OR5K4A6NMS3 321 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 MID1O15344 667 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 ZNF432O94892 652 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 EPOP01588 193 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 ASGR2P07307 311 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 CTSAP10619 480 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 PGAM2P15259 253 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 GSTM3P21266 225 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 ST3GAL3Q11203 375 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 HERC3Q15034 1050 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 LPAL2Q16609 132 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 PIK3R3Q92569 461 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 FAM120CQ9NX05 1096 aaKnown RBP13.18□□□□□ -0.3
GPC6-201ENST00000377047 SDC3O75056 442 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 NR2C1P13056 603 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 OR12D2P58182 307 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 SWI5Q1ZZU3 235 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 HSDL2Q6YN16 418 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 USP53Q70EK8 1073 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 GATSQ8NAP1 163 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 TNFAIP8L1Q8WVP5 186 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 WDR77Q9BQA1 342 aaPredicted RBP13.18□□□□□ -0.3
GPC6-201ENST00000377047 POLR2J2Q9GZM3 115 aaKnown RBP13.18□□□□□ -0.3
GPC6-201ENST00000377047 VRTNQ9H8Y1 702 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 GRHPRQ9UBQ7 328 aa13.18□□□□□ -0.3
GPC6-201ENST00000377047 LRRC37A3O60309 1634 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 ADAM8P78325 824 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 ZNF763Q0D2J5 394 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 KLHL26Q53HC5 615 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 TSGA13Q96PP4 275 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 SLC2A11Q9BYW1 496 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 TAS2R9Q9NYW1 312 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 SLCO3A1Q9UIG8 710 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 CD207Q9UJ71 328 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 K7ERQ8 282 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 M0QX08 132 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 CHRM1P11229 460 aaPredicted RBP13.17□□□□□ -0.3
GPC6-201ENST00000377047 C6P13671 934 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 GLDCP23378 1020 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 ACSL1P33121 698 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 TMEM40Q8WWA1 233 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 IMP4Q96G21 291 aaKnown RBP13.17□□□□□ -0.3
GPC6-201ENST00000377047 CNDP2Q96KP4 475 aaKnown RBP13.17□□□□□ -0.3
GPC6-201ENST00000377047 CMKLR1Q99788 373 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 AGPSO00116 658 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 CNMDO75829 334 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 POU6F2P78424 691 aaPredicted RBP13.17□□□□□ -0.3
GPC6-201ENST00000377047 ZNF678Q5SXM1 525 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 GPAT4Q86UL3 456 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms