RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 TMEM121BQ9BXQ6 578 aaPredicted RBP12.06□□□□□ -0.48
CLCN6-206ENST00000376496 KCNH6Q9H252 994 aa12.06□□□□□ -0.48
CLCN6-206ENST00000376496 TBC1D17Q9HA65 648 aa12.06□□□□□ -0.48
CLCN6-206ENST00000376496 PELI2Q9HAT8 420 aa12.06□□□□□ -0.48
CLCN6-206ENST00000376496 SPASTQ9UBP0 616 aa12.06□□□□□ -0.48
CLCN6-206ENST00000376496 HS3ST3A1Q9Y663 406 aa12.06□□□□□ -0.48
CLCN6-206ENST00000376496 SCN3AQ9NY46 2000 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 A0A1W2PPC4 97 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 C10orf142B7Z368 130 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 PRICKLE3O43900 615 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-206ENST00000376496 STAMBPO95630 424 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 CHRM5P08912 532 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-206ENST00000376496 TPP2P29144 1249 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-206ENST00000376496 PIK3CBP42338 1070 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 RABIFP47224 123 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 AQP4P55087 323 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 YPEL5P62699 121 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 PRKCQQ04759 706 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 ZNF33BQ06732 778 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 ZNF763Q0D2J5 394 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 ILF3Q12906 894 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLCN6-206ENST00000376496 MTAPQ13126 283 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 CYP51A1Q16850 503 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 KHDRBS2Q5VWX1 349 aaKnown RBP12.05□□□□□ -0.48
CLCN6-206ENST00000376496 GLYATQ6IB77 296 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 TAF8Q7Z7C8 310 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 FAM86B1Q8N7N1 296 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 GBP5Q96PP8 586 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 MS4A8Q9BY19 250 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 ZNF717Q9BY31 904 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-206ENST00000376496 SRMSQ9H3Y6 488 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 TAAR2Q9P1P5 351 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 ACTR3BQ9P1U1 418 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 BCAP29Q9UHQ4 241 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 LRRC42Q9Y546 428 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 COLEC10Q9Y6Z7 277 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 SPTY2D1-AS1A0A0U1RR47 76 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 C4orf51C9J302 202 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 TNFP01375 233 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 POLR2CP19387 275 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-206ENST00000376496 PTX3P26022 381 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-206ENST00000376496 CCR5P51681 352 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 C16orf72Q14CZ0 275 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 HMBOX1Q6NT76 420 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 GALNT10Q86SR1 603 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 ADGRF3Q8IZF5 1079 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 TMEM132CQ8N3T6 1108 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 GALNT4Q8N4A0 578 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 OR2T12Q8NG77 320 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 NELL1Q92832 810 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 UBE2E3Q969T4 207 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 PPWD1Q96BP3 646 aaKnown RBP12.05□□□□□ -0.48
CLCN6-206ENST00000376496 CPPED1Q9BRF8 314 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-206ENST00000376496 KIR3DX1Q9H7L2 352 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 RMND5AQ9H871 391 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 LHX9Q9NQ69 397 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 DGKBQ9Y6T7 804 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 CACNA1IQ9P0X4 2223 aa12.05□□□□□ -0.48
CLCN6-206ENST00000376496 A0A096LPI6 279 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 TNFRSF10CO14798 259 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 MAP3K13O43283 966 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 KCNJ13O60928 360 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 PRKRAO75569 313 aaKnown RBP12.04□□□□□ -0.48
CLCN6-206ENST00000376496 NPPAP01160 153 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 NTRK1P04629 796 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 ALDH9A1P49189 494 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 DMWDQ09019 674 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 BNIP2Q12982 314 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 MPEG1Q2M385 716 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 CCNYL2Q5T2Q4 361 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 DEPDC1Q5TB30 811 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 LCN8Q6JVE9 175 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 UBE3DQ7Z6J8 389 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 TRIM48Q8IWZ4 208 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 TMEM102Q8N9M5 508 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-206ENST00000376496 NAF1Q96HR8 494 aaKnown RBP12.04□□□□□ -0.48
CLCN6-206ENST00000376496 C17orf62Q9BQA9 187 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 DPH2Q9BQC3 489 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-206ENST00000376496 PCBD2Q9H0N5 130 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 VPS13AQ96RL7 3174 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 SPAG17Q6Q759 2223 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 C15orf38-AP3S2A0A0A6YYH1 394 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 DHRS12A0PJE2 317 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 NDUFS2O75306 463 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 HOXB9P17482 250 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-206ENST00000376496 PTGER1P34995 402 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 STARD6P59095 220 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 PPP1CAP62136 330 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 GAB1Q13480 694 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 DUOXA1Q1HG43 343 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 MTX3Q5HYI7 312 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 TBCELQ5QJ74 424 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 ZFP1Q6P2D0 407 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 GALNT18Q6P9A2 607 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 ARPINQ7Z6K5 226 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 ADGRG5Q8IZF4 528 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 OR8J3Q8NGG0 315 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLCN6-206ENST00000376496 KLHDC7BQ96G42 594 aa12.04□□□□□ -0.48
CLCN6-206ENST00000376496 TRAPPC9Q96Q05 1148 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms