RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 LHX3Q9UBR4 397 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SEC14L3Q9UDX4 400 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TEKT2Q9UIF3 430 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ATG2BQ96BY7 2078 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TMEM202A6NGA9 273 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 NME6O75414 186 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PSIP1O75475 530 aaKnown RBP13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ACRP10323 421 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SUOXP51687 545 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CD83Q01151 205 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 MLLT1Q03111 559 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 MVKQ03426 396 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 MAD2L1BPQ15013 274 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PLEKHG7Q6ZR37 379 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 GPR149Q86SP6 731 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 MSRB3Q8IXL7 192 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 IQCF1Q8N6M8 205 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TCEANCQ8N8B7 351 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 GOLM1Q8NBJ4 401 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ENKURQ8TC29 256 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 COL21A1Q96P44 957 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 GORASP2Q9H8Y8 452 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ACOT13Q9NPJ3 140 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SEMA3GQ9NS98 782 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 IL20RAQ9UHF4 553 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 MBD1Q9UIS9 605 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SLC45A1Q9Y2W3 748 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 HOXA2O43364 376 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 IFNW1P05000 195 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ALOX5P09917 674 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CDK6Q00534 326 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 INAVAQ3KP66 663 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 DESI1Q6ICB0 168 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 RIMKLAQ8IXN7 391 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ZZZ3Q8IYH5 903 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 HUS1BQ8NHY5 278 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 LINC01599Q8WXQ3 324 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ALOXE3Q9BYJ1 711 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PDFQ9HBH1 243 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 KLHL1Q9NR64 748 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 WNT6Q9Y6F9 365 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 A0A1W2PRB8 838 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 WWP2O00308 870 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 WNT9AO14904 365 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ADAMDEC1O15204 470 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 KIAA0513O60268 411 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PDHA2P29803 388 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SOX3P41225 446 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CBLBQ13191 982 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 MED27Q6P2C8 311 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 KLHL17Q6TDP4 642 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TMEM25Q86YD3 366 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 DEPDC4Q8N2C3 294 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 DCAF4L2Q8NA75 395 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TRNT1Q96Q11 434 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 HDHD2Q9H0R4 259 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 RNF208Q9H0X6 261 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TBC1D17Q9HA65 648 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TRAV19A0A0A6YYK7 116 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CENPXA8MT69 81 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 UPK1AO00322 258 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SERPINB7O75635 380 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 IFNA14P01570 189 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ACVR1Q04771 509 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 DSC1Q08554 894 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 NCF4Q15080 339 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 DPY19L1Q2PZI1 675 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 GPR33Q49SQ1 333 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 GPAT3Q53EU6 434 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 DDI2Q5TDH0 399 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 LIPKQ5VXJ0 399 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ERICH5Q6P6B1 374 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ZNF852Q6ZMS4 543 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CHST9Q7L1S5 443 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CHPT1Q8WUD6 406 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SLC38A4Q969I6 547 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 MUL1Q969V5 352 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CMTM7Q96FZ5 175 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 BBS4Q96RK4 519 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CCM2Q9BSQ5 444 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 RHBGQ9H310 441 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TRPS1Q9UHF7 1281 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 GABRR3A8MPY1 467 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TLX2O43763 284 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 OR2B6P58173 313 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 KCNJ8Q15842 424 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SHQ1Q6PI26 577 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CEACAM20Q6UY09 585 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TMPRSS11AQ6ZMR5 421 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 USP30Q70CQ3 517 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ZNF740Q8NDX6 193 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TBX5Q99593 518 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 NEURL2Q9BR09 285 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CPPED1Q9BRF8 314 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TTYH2Q9BSA4 534 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CENPOQ9BU64 300 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 IL1RAPQ9NPH3 570 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 MARCH5Q9NX47 278 aa13.86□□□□□ -0.19
TNFRSF1B-201ENST00000376259 AP3M1Q9Y2T2 418 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms