RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 KDM1BQ8NB78 822 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 FBXL20Q96IG2 436 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 IL17FQ96PD4 163 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 DGAT2Q96PD7 388 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 ALPK1Q96QP1 1244 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 IL17CQ9P0M4 197 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 CFIP05156 583 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 SRCP12931 536 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 POLR2CP19387 275 aaPredicted RBP13.16□□□□□ -0.3
C9orf47-203ENST00000375851 CCKBRP32239 447 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 SCN1BQ07699 218 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 KBTBD6Q86V97 674 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 ATCAYQ86WG3 371 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 ARHGAP12Q8IWW6 846 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 AVL9Q8NBF6 648 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 AQP11Q8NBQ7 271 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 CHST14Q8NCH0 376 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 EFHD2Q96C19 240 aaPredicted RBP13.16□□□□□ -0.3
C9orf47-203ENST00000375851 TRIM39Q9HCM9 518 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 TM9SF3Q9HD45 589 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 KLF8O95600 359 aaPredicted RBP13.16□□□□□ -0.3
C9orf47-203ENST00000375851 JUPP14923 745 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 DHPSP49366 369 aaPredicted RBP13.16□□□□□ -0.3
C9orf47-203ENST00000375851 HYAL2Q12891 473 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 MYBPC3Q14896 1274 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 C5orf22Q49AR2 442 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 ATG9BQ674R7 924 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 TRNP1Q6NT89 227 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 BLOC1S3Q6QNY0 202 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 CRTC1Q6UUV9 634 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 ADGRD2Q7Z7M1 963 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 GRHL3Q8TE85 626 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 RNF31Q96EP0 1072 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 OR2M4Q96R27 311 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 GPER1Q99527 375 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 UCK2Q9BZX2 261 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 TOR3AQ9H497 397 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 TAS2R9Q9NYW1 312 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 H3BSA7 217 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 VEGFDO43915 354 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 DHRS4L1P0CG22 281 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 ACADLP28330 430 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 SHMT2P34897 504 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 ST3GAL3Q11203 375 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 PKDCCQ504Y2 493 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 LCN1P1Q5VSP4 162 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 CHCHD4Q8N4Q1 142 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 MAPK15Q8TD08 544 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 KLHDC7BQ96G42 594 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 SLC45A3Q96JT2 553 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 PHF12Q96QT6 1004 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 TBX5Q99593 518 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 FARSBQ9NSD9 589 aaKnown RBP13.16□□□□□ -0.3
C9orf47-203ENST00000375851 USP3Q9Y6I4 520 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 A0A096LPI6 279 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 A0A1W2PQU0 124 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 TIA1P31483 386 aaKnown RBP eCLIP13.16□□□□□ -0.3
C9orf47-203ENST00000375851 CDKN1CP49918 316 aaPredicted RBP13.16□□□□□ -0.3
C9orf47-203ENST00000375851 TBPL1P62380 186 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 SIX5Q8N196 739 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 HPS1Q92902 700 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 PDCD10Q9BUL8 212 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 LINC00597Q9H2U6 94 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 TRPV5Q9NQA5 729 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 ING4Q9UNL4 249 aa13.16□□□□□ -0.3
C9orf47-203ENST00000375851 FAM170BA6NMN3 283 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 RLN1P04808 185 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 ATP5A1P25705 553 aaKnown RBP13.15□□□□□ -0.3
C9orf47-203ENST00000375851 MEP1AQ16819 746 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 PRRT3Q5FWE3 981 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 PAQR9Q6ZVX9 377 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 NUP54Q7Z3B4 507 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 GHDCQ8N2G8 530 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 MAPKAP1Q9BPZ7 522 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 KCNS3Q9BQ31 491 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 Q9N2J8 555 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 HRASLS2Q9NWW9 162 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 WDR45Q9Y484 360 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 C6P13671 934 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 HSD3B1P14060 373 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 MATN1P21941 496 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 HSD3B2P26439 372 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 FAUP35544 74 aaKnown RBP13.15□□□□□ -0.3
C9orf47-203ENST00000375851 GRIA2P42262 883 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 ENPP2Q13822 863 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 RAB41Q5JT25 222 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 KLHDC10Q6PID8 442 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 TMEM126BQ8IUX1 230 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 LINC00471Q8N535 108 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 KLHL6Q8WZ60 621 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 IL26Q9NPH9 171 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 MYH9P35579 1960 aaKnown RBP13.15□□□□□ -0.3
C9orf47-203ENST00000375851 IGLON5A6NGN9 336 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 ASGR2P07307 311 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 HTR1EP28566 365 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 CARTPTQ16568 116 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 VMACQ2NL98 169 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 SLC39A11Q8N1S5 342 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 SCML4Q8N228 414 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 MINDY1Q8N5J2 469 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms