RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 GCM2O75603 506 aaPredicted RBP13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 MED26O95402 600 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 POU2F1P14859 743 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 PRPS1L1P21108 318 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 MAPK1P28482 360 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 CSNK2BP67870 215 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 FRG2Q64ET8 278 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 THOC7Q6I9Y2 204 aaKnown RBP13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 ERICH5Q6P6B1 374 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 RFLNAQ6ZTI6 216 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 SPRED2Q7Z698 418 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 VRK3Q8IV63 474 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 TCAIMQ8N3R3 496 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 SYNPOQ8N3V7 929 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 WFDC5Q8TCV5 224 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 FRG2BQ96QU4 278 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 OR5M11Q96RB7 305 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 MTERF1Q99551 399 aaKnown RBP13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 SDHCQ99643 169 aaPredicted RBP13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 NUAK2Q9H093 628 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 PRKAG2Q9UGJ0 569 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 PCDHGB3Q9Y5G1 929 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 TRBV5-4A0A0C4DH59 114 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 ARHGEF15O94989 841 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 AOAHP28039 575 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 UGT2B15P54855 530 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 HECTD3Q5T447 861 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 NXNL2Q5VZ03 156 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 LRRC66Q68CR7 880 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 CHST9Q7L1S5 443 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 SLC39A11Q8N1S5 342 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 NXPE1Q8N323 547 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 GPR26Q8NDV2 337 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 KBTBD8Q8NFY9 601 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 ZNF558Q96NG5 402 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 PLCXD1Q9NUJ7 323 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 WDR70Q9NW82 654 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 NDUFAF4Q9P032 175 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 LYVE1Q9Y5Y7 322 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 A8MV72 311 aaPredicted RBP13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 KIAA0513O60268 411 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 TRBC1P01850 177 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 PTPN2P17706 415 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 DGKEP52429 567 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 ELAVL2Q12926 359 aaKnown RBP13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 PPIGQ13427 754 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 CDKN3Q16667 212 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 TMEM240Q5SV17 173 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 GPR155Q7Z3F1 870 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 ZNF605Q86T29 641 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 GATAD2AQ86YP4 633 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 NAGSQ8N159 534 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 TMEM169Q96HH4 297 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 HTATIP2Q9BUP3 242 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 NDEL1Q9GZM8 345 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 FKBP14Q9NWM8 211 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 MS4A12Q9NXJ0 267 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 KCTD5Q9NXV2 234 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 PCDHB11Q9Y5F2 797 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 N6AMT1Q9Y5N5 214 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 PDE4DIPQ5VU43 2346 aa13.6□□□□□ -0.23
CLCNKA-202ENST00000375692 C2orf78A6NCI8 922 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 PCDH7O60245 1069 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 CYP7B1O75881 506 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 ABCB1P08183 1280 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 CSKP41240 450 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 B4GALNT1Q00973 533 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 SRSF11Q05519 484 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 DMPKQ09013 629 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 CHIT1Q13231 466 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 BCL7AQ4VC05 210 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 SPANXN2Q5MJ10 180 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 C10orf62Q5T681 223 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 ADNP2Q6IQ32 1131 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 METTL2BQ6P1Q9 378 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 FAM9CQ8IZT9 166 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 OR10G2Q8NGC3 310 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 TP53INP1Q96A56 240 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 COPS8Q99627 209 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 P2RY13Q9BPV8 354 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 CCM2Q9BSQ5 444 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 MOV10Q9HCE1 1003 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 PRM3Q9NNZ6 103 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 CCDC59Q9P031 241 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 RAPGEFL1Q9UHV5 662 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 PCDHGA2Q9Y5H1 932 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 A3GALT2U3KPV4 340 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 AGRPO00253 132 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 ZW10O43264 779 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 KRT8P05787 483 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 CD22P20273 847 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 PRPH2P23942 346 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 LIMK1P53667 647 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 CDH12P55289 794 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 OR2B6P58173 313 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 GAB1Q13480 694 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 BOP1Q14137 746 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 MED22Q15528 200 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 NDUFA5Q16718 116 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 AGAP6Q5VW22 663 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms