RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 IL12RB1P42701 662 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 ZNF648Q5T619 568 aaPredicted RBP12.69□□□□□ -0.38
CUL4A-203ENST00000375441 CADM3Q8N126 398 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 NAGSQ8N159 534 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 XAGE5Q8WWM1 108 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 UBE2E3Q969T4 207 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 NACC2Q96BF6 587 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 DEFB118Q96PH6 123 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 ZIC5Q96T25 663 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 RIOK2Q9BVS4 552 aaKnown RBP12.69□□□□□ -0.38
CUL4A-203ENST00000375441 OR51E2Q9H255 320 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 WDR70Q9NW82 654 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 MKLN1Q9UL63 735 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 TRIM64CA6NLI5 447 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 H7C0S8 307 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 CA12O43570 354 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 TSC22D2O75157 780 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 JRKO75564 520 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 UPK1BO75841 260 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 WISP3O95389 354 aaPredicted RBP12.69□□□□□ -0.38
CUL4A-203ENST00000375441 DNTTP04053 509 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 NUDT7P0C024 238 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 AMD1P17707 334 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 ATAD3BQ5T9A4 648 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 ZNF57Q68EA5 555 aaPredicted RBP12.69□□□□□ -0.38
CUL4A-203ENST00000375441 RAET1GQ6H3X3 334 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 CRTC1Q6UUV9 634 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 SLC7A5P1Q8MH63 180 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 KRT78Q8N1N4 520 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 GEMIN6Q8WXD5 167 aaKnown RBP12.69□□□□□ -0.38
CUL4A-203ENST00000375441 TMCO6Q96DC7 493 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 TEFMQ96QE5 360 aaKnown RBP12.69□□□□□ -0.38
CUL4A-203ENST00000375441 FAM129BQ96TA1 746 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 MGLLQ99685 303 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 NEURL2Q9BR09 285 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 FNDC11Q9BVV2 318 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 SLC12A9Q9BXP2 914 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 TVP23BQ9NYZ1 205 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 ZNF639Q9UID6 485 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 ACSL6Q9UKU0 697 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 HCN4Q9Y3Q4 1203 aa12.69□□□□□ -0.38
CUL4A-203ENST00000375441 CLCA1A8K7I4 914 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 KIAA0513O60268 411 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 LMAN2Q12907 356 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 SPIN4Q56A73 249 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 TJAP1Q5JTD0 557 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 TMEM203Q969S6 136 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 BARD1Q99728 777 aaKnown RBP12.68□□□□□ -0.38
CUL4A-203ENST00000375441 SLC30A2Q9BRI3 323 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 RDH14Q9HBH5 336 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 CPNE5Q9HCH3 593 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 NUP214P35658 2090 aaPredicted RBP12.68□□□□□ -0.38
CUL4A-203ENST00000375441 SDK1Q7Z5N4 2213 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 ADAM23O75077 832 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 OXSR1O95747 527 aaPredicted RBP12.68□□□□□ -0.38
CUL4A-203ENST00000375441 KLK1P06870 262 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 GPR1P46091 355 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 PTPN5P54829 565 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 ARHGAP15Q53QZ3 475 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 LIPJQ5W064 366 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 CST9Q5W186 159 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 USP30Q70CQ3 517 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 RTN4RL1Q86UN2 441 aaPredicted RBP12.68□□□□□ -0.38
CUL4A-203ENST00000375441 RNF130Q86XS8 419 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 BBS4Q96RK4 519 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 RHNO1Q9BSD3 238 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 WRAP53Q9BUR4 548 aaKnown RBP12.68□□□□□ -0.38
CUL4A-203ENST00000375441 HDHD2Q9H0R4 259 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 TMEM245Q9H330 911 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 CTPS2Q9NRF8 586 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 ERVK13-1Q9NX77 482 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 A8MV72 311 aaPredicted RBP12.68□□□□□ -0.38
CUL4A-203ENST00000375441 UPK1AO00322 258 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 CKMT1AP12532 417 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 SLC35A2P78381 396 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 SCN1BQ07699 218 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 HSPB3Q12988 150 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 QPRTQ15274 297 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 KCNJ8Q15842 424 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 TUBA3EQ6PEY2 450 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 OXR1Q8N573 874 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 OVCA2Q8WZ82 227 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 POLR2J3Q9H1A7 115 aaKnown RBP12.68□□□□□ -0.38
CUL4A-203ENST00000375441 OSGEPL1Q9H4B0 414 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 DNAJC27Q9NZQ0 273 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 ERVW-1Q9UQF0 538 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 LYVE1Q9Y5Y7 322 aa12.68□□□□□ -0.38
CUL4A-203ENST00000375441 ZFC3H1O60293 1989 aaKnown RBP12.67□□□□□ -0.38
CUL4A-203ENST00000375441 CD9P21926 228 aa12.67□□□□□ -0.38
CUL4A-203ENST00000375441 TGFBR1P36897 503 aa12.67□□□□□ -0.38
CUL4A-203ENST00000375441 SMIM11AP58511 58 aa12.67□□□□□ -0.38
CUL4A-203ENST00000375441 TAS2R50P59544 299 aa12.67□□□□□ -0.38
CUL4A-203ENST00000375441 EIF4EBP2Q13542 120 aaPredicted RBP12.67□□□□□ -0.38
CUL4A-203ENST00000375441 SYT6Q5T7P8 510 aaPredicted RBP12.67□□□□□ -0.38
CUL4A-203ENST00000375441 SERPINA13PQ6UXR4 307 aa12.67□□□□□ -0.38
CUL4A-203ENST00000375441 CBLL1Q75N03 491 aa12.67□□□□□ -0.38
CUL4A-203ENST00000375441 PJA1Q8NG27 643 aa12.67□□□□□ -0.38
CUL4A-203ENST00000375441 EXOSC8Q96B26 276 aaKnown RBP12.67□□□□□ -0.38
CUL4A-203ENST00000375441 TESCQ96BS2 214 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms