RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 OSBPL10Q9BXB5 764 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 TMEM245Q9H330 911 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 TOR3AQ9H497 397 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 C8orf33Q9H7E9 229 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-202ENST00000374487 ITM2CQ9NQX7 267 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 SH3BP4Q9P0V3 963 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 GPR34Q9UPC5 381 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 U3KQV3 271 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 VEGFDO43915 354 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 PCDH7O60245 1069 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 SCN2BO60939 215 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 KCNK5O95279 499 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 EPHX1P07099 455 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 C1GALT1C1LP0DN25 315 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 GPX2P18283 190 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 C21orf58P58505 322 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 RAE1P78406 368 aaKnown RBP11.62□□□□□ -0.55
HMGCL-202ENST00000374487 SLBPQ14493 270 aaKnown RBP eCLIP11.62□□□□□ -0.55
HMGCL-202ENST00000374487 NFE2L1Q14494 772 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 VMACQ2NL98 169 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 ZNF658BQ4V348 819 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-202ENST00000374487 ANXA8L1Q5VT79 327 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 ERICH5Q6P6B1 374 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 ZNF547Q8IVP9 402 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 ZDHHC21Q8IVQ6 265 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 TERB1Q8NA31 727 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 OR2L2Q8NH16 312 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 OR5K1Q8NHB7 308 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 DDX18Q9NVP1 670 aaKnown RBP11.62□□□□□ -0.55
HMGCL-202ENST00000374487 RPS6KA6Q9UK32 745 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 BAG5Q9UL15 447 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 ASF1AQ9Y294 204 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 BTBD3Q9Y2F9 522 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 TMEM98Q9Y2Y6 226 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 PRKAB1Q9Y478 270 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 PCDHB11Q9Y5F2 797 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 ORC6Q9Y5N6 252 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 MAN2B1O00754 1011 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 HS6ST1O60243 411 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 C1QCP02747 245 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 PRKACGP22612 351 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 TIA1P31483 386 aaKnown RBP eCLIP11.62□□□□□ -0.55
HMGCL-202ENST00000374487 DCTP40126 519 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 CDK9P50750 372 aaKnown RBP11.62□□□□□ -0.55
HMGCL-202ENST00000374487 ARHGDIAP52565 204 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 TAP2Q03519 686 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 TMEM52BQ4KMG9 183 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 C10orf62Q5T681 223 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-202ENST00000374487 ZNF551Q7Z340 670 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-202ENST00000374487 HIPK1Q86Z02 1210 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 ALDH16A1Q8IZ83 802 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 C8orf59Q8N0T1 100 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-202ENST00000374487 LMNTD1Q8N9Z9 388 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 CLDN23Q96B33 292 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 LINC00615Q96LM1 132 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-202ENST00000374487 SH3GL3Q99963 347 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 SGPP1Q9BX95 441 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 DPEP2Q9H4A9 486 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 TPT1P8Q9HAU6 139 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 CCDC177Q9NQR7 707 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-202ENST00000374487 FAM118AQ9NWS6 357 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 C3orf18Q9UK00 162 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 HCN2Q9UL51 889 aa11.62□□□□□ -0.55
HMGCL-202ENST00000374487 TRIM64A6NGJ6 449 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 TRIM64CA6NLI5 447 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 K7EQS6 105 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 YY2O15391 372 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 TRMUO75648 421 aaKnown RBP11.61□□□□□ -0.55
HMGCL-202ENST00000374487 FKBP9O95302 570 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 TGFB1P01137 390 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 SLC5A2P31639 672 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 KDELR2P33947 212 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 P2RY2P41231 377 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 YAP1P46937 504 aaKnown RBP11.61□□□□□ -0.55
HMGCL-202ENST00000374487 PXNP49023 591 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-202ENST00000374487 PPP2R2BQ00005 443 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 ZBED5Q49AG3 693 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 C2orf27AQ580R0 203 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 CPZQ66K79 652 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 THAP5Q7Z6K1 395 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 ZZZ3Q8IYH5 903 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 ADAMTS16Q8TE57 1224 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 SLC5A11Q8WWX8 675 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 DPH2Q9BQC3 489 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-202ENST00000374487 ADNPQ9H2P0 1102 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 USE1Q9NZ43 259 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 IFT80Q9P2H3 777 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-202ENST00000374487 BTNL2Q9UIR0 455 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 PIPSLA2A3N6 862 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 FOXE1O00358 373 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-202ENST00000374487 SAP18O00422 153 aaKnown RBP11.61□□□□□ -0.55
HMGCL-202ENST00000374487 GBAP04062 536 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 NTRK1P04629 796 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 ABCB1P08183 1280 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-202ENST00000374487 PPIBP23284 216 aaKnown RBP11.61□□□□□ -0.55
HMGCL-202ENST00000374487 ELK4P28324 431 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 IL12RB1P42701 662 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 MEF2AQ02078 507 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-202ENST00000374487 DMWDQ09019 674 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 ZNF763Q0D2J5 394 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms