RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 RNF175Q8N4F7 328 aa14□□□□□ -0.17
SMPDL3B-201ENST00000373888 DNAJC22Q8N4W6 341 aa14□□□□□ -0.17
SMPDL3B-201ENST00000373888 OR2T11Q8NH01 316 aa14□□□□□ -0.17
SMPDL3B-201ENST00000373888 CREB3L4Q8TEY5 395 aa14□□□□□ -0.17
SMPDL3B-201ENST00000373888 KLHL6Q8WZ60 621 aa14□□□□□ -0.17
SMPDL3B-201ENST00000373888 SLC41A2Q96JW4 573 aa14□□□□□ -0.17
SMPDL3B-201ENST00000373888 PPP1R36Q96LQ0 422 aa14□□□□□ -0.17
SMPDL3B-201ENST00000373888 ACPTQ9BZG2 426 aa14□□□□□ -0.17
SMPDL3B-201ENST00000373888 ZNF768Q9H5H4 540 aaKnown RBP14□□□□□ -0.17
SMPDL3B-201ENST00000373888 SYNPO2LQ9H987 977 aa14□□□□□ -0.17
SMPDL3B-201ENST00000373888 FAM60AQ9NP50 221 aa14□□□□□ -0.17
SMPDL3B-201ENST00000373888 TCF7L2Q9NQB0 619 aa14□□□□□ -0.17
SMPDL3B-201ENST00000373888 RIC8BQ9NVN3 520 aa14□□□□□ -0.17
SMPDL3B-201ENST00000373888 A0A0J9YVX5 310 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 IGHV5-10-1A0A0J9YXX1 117 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 RGS14O43566 566 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 VPS4BO75351 444 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 RFPL3O75679 317 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 TBX6O95947 436 aaPredicted RBP13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 KRT16P08779 473 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 PRR35P0CG20 571 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 PRPH2P23942 346 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 EPHA3P29320 983 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 PRDX6P30041 224 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 RPS13P62277 151 aaKnown RBP13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 HSD11B2P80365 405 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 SPIDRQ14159 915 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 DNAL1Q4LDG9 190 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 ZC3H12BQ5HYM0 836 aaKnown RBP13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 SNAP47Q5SQN1 464 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 FBXW10Q5XX13 1052 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 VN1R4Q7Z5H5 301 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 SLITRK4Q8IW52 837 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 PARP9Q8IXQ6 854 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 TRPV3Q8NET8 790 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 ACTRT2Q8TDY3 377 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 FCRL4Q96PJ5 515 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 MS4A8Q9BY19 250 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 C1orf21Q9H246 121 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 MMADHCQ9H3L0 296 aaPredicted RBP13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 WDR55Q9H6Y2 383 aaPredicted RBP13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 SYNDIG1Q9H7V2 258 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 PDE7BQ9NP56 450 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 SOHLH2Q9NX45 425 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 PCDHGA1Q9Y5H4 931 aa13.99□□□□□ -0.17
SMPDL3B-201ENST00000373888 ATP6AP2A0A1C7CYW4 349 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 LSM1O15116 133 aaKnown RBP13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 GYG2O15488 501 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 MAP3K7O43318 606 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 ATP6AP2O75787 350 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 RSL1D1O76021 490 aaKnown RBP13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 NELFEP18615 380 aaKnown RBP13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 MLLT3P42568 568 aaPredicted RBP13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 GABRA4P48169 554 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 CYP4F2P78329 520 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 E2F1Q01094 437 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 HMGCS1Q01581 520 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 TRIP6Q15654 476 aaKnown RBP13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 IMPG1Q17R60 797 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 FRMPD2BQ6IN97 320 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 LARP4Q71RC2 724 aaKnown RBP eCLIP13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 D2HGDHQ8N465 521 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 KIF2BQ8N4N8 673 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 NETO1Q8TDF5 533 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 TUBGCP3Q96CW5 907 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 TM4SF19Q96DZ7 209 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 CMTM5Q96DZ9 223 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 CMTM7Q96FZ5 175 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 CCDC74BQ96LY2 380 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 OR52B2Q96RD2 323 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 SERPINI1Q99574 410 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 AKTIPQ9H8T0 292 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 TOR4AQ9NXH8 423 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 ARMCX1Q9P291 453 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 RAPGEFL1Q9UHV5 662 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 UNC13CQ8NB66 2214 aa13.98□□□□□ -0.17
SMPDL3B-201ENST00000373888 RIF1Q5UIP0 2472 aaKnown RBP13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 LOC105369274A0A096LPK9 316 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 LOC102723532A0A0G2JNH3 316 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 H0YGG7 62 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 ETHE1O95571 254 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 MSL3P1P0C860 447 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 PTX3P26022 381 aaPredicted RBP13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 SEPHS1P49903 392 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 ARF3P61204 181 aaPredicted RBP13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 ZFP36L1Q07352 338 aaKnown RBP13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 TRA2AQ13595 282 aaKnown RBP eCLIP13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 PWP1Q13610 501 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 CUL3Q13618 768 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 NR6A1Q15406 480 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 SNCBQ16143 134 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 ADPRMQ3LIE5 342 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 LSM12Q3MHD2 195 aaKnown RBP13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 ASPGQ86U10 573 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 MCATQ8IVS2 390 aaKnown RBP13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 OR4N4Q8N0Y3 316 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 CEP70Q8NHQ1 597 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 NT5CQ8TCD5 201 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 SLC13A3Q8WWT9 602 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 RERGQ96A58 199 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms