RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 SMARCD3Q6STE5 483 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 TSPAN33Q86UF1 283 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 C10orf53Q8N6V4 93 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 ARNTL2Q8WYA1 636 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 FCRL2Q96LA5 508 aaPredicted RBP14.92□□□□□ -0.02
SRPK1-204ENST00000373825 P2RX7Q99572 595 aaKnown RBP14.92□□□□□ -0.02
SRPK1-204ENST00000373825 GSX2Q9BZM3 304 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 ZNF350Q9GZX5 532 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 ASB8Q9H765 288 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 SDR39U1Q9NRG7 319 aaPredicted RBP14.92□□□□□ -0.02
SRPK1-204ENST00000373825 KCTD5Q9NXV2 234 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 VAPAQ9P0L0 249 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 SEC14L3Q9UDX4 400 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 NIPSNAP2O75323 286 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 TNFRSF1BP20333 461 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 SLC3A1Q07837 685 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 CYS1Q717R9 158 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 NELL2Q99435 816 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 A0A1W2PPK0 400 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 CD8B2A6NJW9 211 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 UBFD1O14562 309 aaKnown RBP14.92□□□□□ -0.02
SRPK1-204ENST00000373825 CYP17A1P05093 508 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 CSN2P05814 226 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 CD8BP10966 210 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 CD6P30203 668 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 CBX5P45973 191 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 XKR6Q5GH73 641 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 ADNP2Q6IQ32 1131 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 LSMEM2Q8N112 164 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 ZNF454Q8N9F8 522 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 DENND6BQ8NEG7 585 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 GTF3C2Q8WUA4 911 aaPredicted RBP14.92□□□□□ -0.02
SRPK1-204ENST00000373825 IFT27Q9BW83 186 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 TSSK6Q9BXA6 273 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 AMBRA1Q9C0C7 1298 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 ZNF334Q9HCZ1 680 aaPredicted RBP14.92□□□□□ -0.02
SRPK1-204ENST00000373825 SLC23A1Q9UHI7 598 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 FZD4Q9ULV1 537 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 FZD10Q9ULW2 581 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 STUB1Q9UNE7 303 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 ACTL7AQ9Y615 435 aa14.92□□□□□ -0.02
SRPK1-204ENST00000373825 KRBOX1C9JBD0 128 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 CAPN5O15484 640 aaPredicted RBP14.91□□□□□ -0.02
SRPK1-204ENST00000373825 REM1O75628 298 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 C1QBP02746 253 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 DUSP7Q16829 419 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 CRB2Q5IJ48 1285 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 WSCD1Q658N2 575 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 NOTUMQ6P988 496 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 OR4F6Q8NGB9 312 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 FAM163AQ96GL9 167 aaPredicted RBP14.91□□□□□ -0.02
SRPK1-204ENST00000373825 MCCC1Q96RQ3 725 aaPredicted RBP14.91□□□□□ -0.02
SRPK1-204ENST00000373825 SEC22CQ9BRL7 303 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 ATG10Q9H0Y0 220 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 UPK3BL1B0FP48 263 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 UPK3BL2E5RIL1 263 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 F5H0A9 414 aaPredicted RBP14.91□□□□□ -0.02
SRPK1-204ENST00000373825 OR1I1O60431 355 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 PTHP01270 115 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 DDX6P26196 483 aaKnown RBP eCLIP14.91□□□□□ -0.022e-12■■■■□ 26.7
SRPK1-204ENST00000373825 TAF13Q15543 124 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 KLHL22Q53GT1 634 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 SYT6Q5T7P8 510 aaPredicted RBP14.91□□□□□ -0.02
SRPK1-204ENST00000373825 LARP4Q71RC2 724 aaKnown RBP eCLIP14.91□□□□□ -0.02
SRPK1-204ENST00000373825 ENTHD1Q8IYW4 607 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 LINC00116Q8NCU8 138 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 SLC9A6Q92581 669 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 ZNF419Q96HQ0 510 aaPredicted RBP14.91□□□□□ -0.02
SRPK1-204ENST00000373825 TGIF2Q9GZN2 237 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 METTL17Q9H7H0 456 aaPredicted RBP14.91□□□□□ -0.02
SRPK1-204ENST00000373825 ZNF408Q9H9D4 720 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 BCL9LQ86UU0 1499 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 RIMBP3CA6NJZ7 1639 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 RIMBP3BA6NNM3 1639 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 RIMBP3Q9UFD9 1639 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 A0A075B6Q4 140 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 ADRA2BP18089 450 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 VIPR1P32241 457 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 WNT7BP56706 349 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 CRYZQ08257 329 aaKnown RBP14.91□□□□□ -0.02
SRPK1-204ENST00000373825 SPNS2Q8IVW8 549 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 WDSUB1Q8N9V3 476 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 XAGE5Q8WWM1 108 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 NR4A3Q92570 626 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 ERVK-19Q9WJR5 959 aa14.91□□□□□ -0.02
SRPK1-204ENST00000373825 ZCWPW2A0A1B0GU75 182 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 ZNF195O14628 629 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 STK16O75716 305 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 RLN2P04090 185 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 SRCP12931 536 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 HNF1BP35680 557 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 GRM7Q14831 915 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 COL28A1Q2UY09 1125 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 SPATS1Q496A3 300 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 ZMAT1Q5H9K5 638 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 GPRC6AQ5T6X5 926 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 ZNF425Q6IV72 752 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 DCLRE1AQ6PJP8 1040 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 CORO6Q6QEF8 472 aa14.9□□□□□ -0.02
SRPK1-204ENST00000373825 ZNF730Q6ZMV8 503 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms