RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 LIPMQ5VYY2 423 aa17.44■□□□□ 0.38
PBX3-202ENST00000373482 ZNF385CQ66K41 422 aaPredicted RBP17.44■□□□□ 0.38
PBX3-202ENST00000373482 MILR1Q7Z6M3 343 aa17.44■□□□□ 0.38
PBX3-202ENST00000373482 VASH2Q86V25 355 aa17.44■□□□□ 0.38
PBX3-202ENST00000373482 CCNYL1Q8N7R7 359 aa17.44■□□□□ 0.38
PBX3-202ENST00000373482 L3MBTL4Q8NA19 623 aa17.44■□□□□ 0.38
PBX3-202ENST00000373482 MACROD1Q9BQ69 325 aa17.44■□□□□ 0.38
PBX3-202ENST00000373482 FAM117AQ9C073 453 aa17.44■□□□□ 0.38
PBX3-202ENST00000373482 CHST8Q9H2A9 424 aa17.44■□□□□ 0.38
PBX3-202ENST00000373482 VIPAS39Q9H9C1 493 aa17.44■□□□□ 0.38
PBX3-202ENST00000373482 TMBIM4Q9HC24 238 aa17.44■□□□□ 0.38
PBX3-202ENST00000373482 ZBTB26Q9HCK0 441 aa17.44■□□□□ 0.38
PBX3-202ENST00000373482 ZNF304Q9HCX3 659 aa17.44■□□□□ 0.38
PBX3-202ENST00000373482 IFT80Q9P2H3 777 aaPredicted RBP17.44■□□□□ 0.38
PBX3-202ENST00000373482 ADGRE2Q9UHX3 823 aa17.44■□□□□ 0.38
PBX3-202ENST00000373482 ZNF490Q9ULM2 529 aaPredicted RBP17.44■□□□□ 0.38
PBX3-202ENST00000373482 UQCRHLA0A096LP55 91 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 CLEC3AO75596 197 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 MLYCDO95822 493 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 UQCRHP07919 91 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 SERPINA6P08185 405 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 PCNAP12004 261 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 AVPR1BP47901 424 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 STXBP1P61764 594 aaKnown RBP17.43■□□□□ 0.38
PBX3-202ENST00000373482 SKP1P63208 163 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 DNASE1L3Q13609 305 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 PCLAFQ15004 111 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 CPSF6Q16630 551 aaKnown RBP eCLIP17.43■□□□□ 0.38
PBX3-202ENST00000373482 NKAIN1Q4KMZ8 207 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 TMEM214Q6NUQ4 689 aaKnown RBP17.43■□□□□ 0.38
PBX3-202ENST00000373482 NIPAL1Q6NVV3 410 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 RPS27LQ71UM5 84 aaKnown RBP17.43■□□□□ 0.38
PBX3-202ENST00000373482 ABHD13Q7L211 337 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 LAS2Q8IYD9 372 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 GOLGA6L1Q8N7Z2 621 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 ZSCAN1Q8NBB4 408 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 KCT2Q8NC54 265 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 OR52B6Q8NGF0 335 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 ZCCHC10Q8TBK6 192 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 TRPC4APQ8TEL6 797 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 CT55Q8WUE5 264 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 MOCOSQ96EN8 888 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 GPR87Q9BY21 358 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 RHBGQ9H310 441 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 AKIRIN1Q9H9L7 192 aaPredicted RBP17.43■□□□□ 0.38
PBX3-202ENST00000373482 ANKHQ9HCJ1 492 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 KCNK9Q9NPC2 374 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 RNF11Q9Y3C5 154 aa17.43■□□□□ 0.38
PBX3-202ENST00000373482 ANKRD11Q6UB99 2663 aaPredicted RBP17.43■□□□□ 0.38
PBX3-202ENST00000373482 DMXL2Q8TDJ6 3036 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 SRRM3A6NNA2 597 aaPredicted RBP17.42■□□□□ 0.38
PBX3-202ENST00000373482 TM9SF1O15321 606 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 TRIM13O60858 407 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 RAB40ALP0C0E4 278 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 ATXN8OSP0DMR3 200 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 LIFP15018 202 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 NAGLUP54802 743 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 TMPRSS3P57727 454 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 TLE3Q04726 772 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 TRAF3Q13114 568 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 COL9A2Q14055 689 aaPredicted RBP17.42■□□□□ 0.38
PBX3-202ENST00000373482 HERC3Q15034 1050 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 TOR1AIP1Q5JTV8 583 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 ARHGAP40Q5TG30 622 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 MLIPQ5VWP3 458 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 TTC19Q6DKK2 380 aaPredicted RBP17.42■□□□□ 0.38
PBX3-202ENST00000373482 CCDC81Q6ZN84 652 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 C10orf107Q8IVU9 208 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 ARHGEF39Q8N4T4 335 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 METTL27Q8N6F8 245 aaPredicted RBP17.42■□□□□ 0.38
PBX3-202ENST00000373482 OR7G3Q8NG95 312 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 OR4F6Q8NGB9 312 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 CREB3L4Q8TEY5 395 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 COL26A1Q96A83 441 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 MMABQ96EY8 250 aaPredicted RBP17.42■□□□□ 0.38
PBX3-202ENST00000373482 CDK15Q96Q40 435 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 SLC6A16Q9GZN6 736 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 PADI2Q9Y2J8 665 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 SLC22A7Q9Y694 548 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 MAU2Q9Y6X3 613 aa17.42■□□□□ 0.38
PBX3-202ENST00000373482 A0A0A6YYC8 382 aaPredicted RBP17.41■□□□□ 0.38
PBX3-202ENST00000373482 H0YIV9 168 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 I3L1I5 382 aaPredicted RBP17.41■□□□□ 0.38
PBX3-202ENST00000373482 ZWINTO95229 277 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 MED26O95402 600 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 NSA2O95478 260 aaKnown RBP17.41■□□□□ 0.38
PBX3-202ENST00000373482 TSPAN8P19075 237 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 FBLP22087 321 aaKnown RBP17.41■□□□□ 0.38
PBX3-202ENST00000373482 ITPKBP27987 946 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 OR1D4P47884 311 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 DDX39BQ13838 428 aaKnown RBP17.41■□□□□ 0.38
PBX3-202ENST00000373482 SLC9A5Q14940 896 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 GGTA1PQ4G0N0 100 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 AGBL2Q5U5Z8 902 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 LCN10Q6JVE6 187 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 FKBP10Q96AY3 582 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 ZNF382Q96SR6 550 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 ACBD3Q9H3P7 528 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 GSTO2Q9H4Y5 243 aa17.41■□□□□ 0.38
PBX3-202ENST00000373482 ACSS2Q9NR19 701 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms