RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 TRBC2A0A5B9 178 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 SPATA31D3P0C874 917 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 PIM1P11309 404 aaPredicted RBP10.26□□□□□ -0.77
PGK1-201ENST00000373316 G6PDP11413 515 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 HMGCLP35914 325 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 RUNDC3AQ59EK9 446 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 RAB41Q5JT25 222 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 TMEM198Q66K66 360 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 TRNP1Q6NT89 227 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 SPATA31D4Q6ZUB0 917 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 FAM83CQ9BQN1 747 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 ACTR6Q9GZN1 396 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 RMI1Q9H9A7 625 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 POLMQ9NP87 494 aaPredicted RBP10.26□□□□□ -0.77
PGK1-201ENST00000373316 MAT2BQ9NZL9 334 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 INSL5Q9Y5Q6 135 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 U3KQV3 271 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 SIP14410 1827 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 LRRC14BA6NHZ5 514 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 LOC730098B7Z3J9 87 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 G3V2L1 256 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 TEX28O15482 410 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 OR5F1O95221 314 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 SAGP10523 405 aaPredicted RBP10.26□□□□□ -0.77
PGK1-201ENST00000373316 ADH5P11766 374 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 UGT1A6P19224 532 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 UGT1A1P22309 533 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 UGT1A4P22310 534 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 STARP49675 285 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 CCR4P51679 360 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 PITX1P78337 314 aaPredicted RBP10.26□□□□□ -0.77
PGK1-201ENST00000373316 C6orf141Q5SZD1 244 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 MPP7Q5T2T1 576 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 HACD4Q5VWC8 232 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 ZSWIM9Q86XI8 627 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 CHERPQ8IWX8 916 aaKnown RBP10.26□□□□□ -0.77
PGK1-201ENST00000373316 ZNF440Q8IYI8 595 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 ZBTB8BQ8NAP8 495 aaPredicted RBP10.26□□□□□ -0.77
PGK1-201ENST00000373316 SH3RF2Q8TEC5 729 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 KBTBD7Q8WVZ9 684 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 WDR26Q9H7D7 661 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 GALPQ9UBC7 116 aa10.26□□□□□ -0.77
PGK1-201ENST00000373316 hCG_2039718K7EN88 272 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 GABBR2O75899 941 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 RHCEP18577 417 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 RBM34P42696 430 aaKnown RBP10.25□□□□□ -0.77
PGK1-201ENST00000373316 ATP12AP54707 1039 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 TCTN1Q2MV58 587 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 CYBRD1Q53TN4 286 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 TLDC1Q6P9B6 456 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 RD3Q7Z3Z2 195 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 TSPYL5Q86VY4 417 aaPredicted RBP10.25□□□□□ -0.77
PGK1-201ENST00000373316 ZNF280BQ86YH2 543 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 COX18Q8N8Q8 333 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 VANGL1Q8TAA9 524 aaPredicted RBP10.25□□□□□ -0.77
PGK1-201ENST00000373316 DNASE1L2Q92874 299 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 WDR6Q9NNW5 1121 aaKnown RBP10.25□□□□□ -0.77
PGK1-201ENST00000373316 TMEM30AQ9NV96 361 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 SLC2A6Q9UGQ3 507 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 A0A1W2PQ45 241 aaPredicted RBP10.25□□□□□ -0.77
PGK1-201ENST00000373316 A0A1W2PQY0 241 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 CDC7O00311 574 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 LSM1O15116 133 aaKnown RBP10.25□□□□□ -0.77
PGK1-201ENST00000373316 IFNA7P01567 189 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 IGHA2P01877 340 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 ACVR2AP27037 513 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 CD40LGP29965 261 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 TIA1P31483 386 aaKnown RBP eCLIP10.25□□□□□ -0.772e-9■■■■□ 23.5
PGK1-201ENST00000373316 SHMT2P34897 504 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 TARDBPQ13148 414 aaKnown RBP eCLIP10.25□□□□□ -0.774e-26■■■■■ 118.9
PGK1-201ENST00000373316 KIAA1324Q6UXG2 1013 aaKnown RBP10.25□□□□□ -0.77
PGK1-201ENST00000373316 LINGO4Q6UY18 593 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 DENND6BQ8NEG7 585 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 PXYLP1Q8TE99 480 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 FBXL8Q96CD0 374 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 PIP5K1AQ99755 562 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 SRMSQ9H3Y6 488 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 TOR3AQ9H497 397 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 OAS3Q9Y6K5 1087 aaKnown RBP10.25□□□□□ -0.77
PGK1-201ENST00000373316 DAPL1A0PJW8 107 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 IL3P08700 152 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 NT5EP21589 574 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 MSX2P35548 267 aaPredicted RBP10.25□□□□□ -0.77
PGK1-201ENST00000373316 SLC15A1P46059 708 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 OR2B6P58173 313 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 CLCA4Q14CN2 919 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 CRB2Q5IJ48 1285 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 LHX8Q68G74 356 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 SLC2A7Q6PXP3 512 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 SLC15A3Q8IY34 581 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 ARFGAP1Q8N6T3 406 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 ZNF563Q8TA94 476 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 HCAR2Q8TDS4 363 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 SLC30A2Q9BRI3 323 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 TAPBPLQ9BX59 468 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 GORASP2Q9H8Y8 452 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 TMEM181Q9P2C4 612 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 CMAHPQ9Y471 501 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 PCDHGA4Q9Y5G9 962 aa10.25□□□□□ -0.77
PGK1-201ENST00000373316 TTC24A2A3L6 582 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms