RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 PAQR7Q86WK9 346 aa18.17■□□□□ 0.5
TRAPPC3-204ENST00000373166 LRRC56Q8IYG6 542 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC3-204ENST00000373166 MNS1Q8NEH6 495 aa18.17■□□□□ 0.5
TRAPPC3-204ENST00000373166 TRIM44Q96DX7 344 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC3-204ENST00000373166 VPS39Q96JC1 886 aa18.17■□□□□ 0.5
TRAPPC3-204ENST00000373166 RNF32Q9H0A6 362 aa18.17■□□□□ 0.5
TRAPPC3-204ENST00000373166 PCBD2Q9H0N5 130 aa18.17■□□□□ 0.5
TRAPPC3-204ENST00000373166 RIC8BQ9NVN3 520 aa18.17■□□□□ 0.5
TRAPPC3-204ENST00000373166 CDC14AQ9UNH5 594 aa18.17■□□□□ 0.5
TRAPPC3-204ENST00000373166 SETD2Q9BYW2 2564 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 IGHV1-45A0A0A0MS14 117 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 A0A1W2PQ72 361 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 TCRBV9S1A1TA0A576 114 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 ESYT3A0FGR9 886 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 IDSB3KWA1 339 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 PRPF4O43172 522 aaKnown RBP eCLIP18.16■□□□□ 0.51e-9■■■■■ 35.4
TRAPPC3-204ENST00000373166 ENO2P09104 434 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 ICAM2P13598 275 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 AGAP20933 346 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 CCND1P24385 295 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 SMSP52788 366 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 PGGT1BP53609 377 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 AP1S2P56377 157 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 SLC7A5Q01650 507 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 PHKG1Q16816 387 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 ZNF425Q6IV72 752 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 AGTRAPQ6RW13 159 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 MBOAT1Q6ZNC8 495 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 ZNF295-AS1Q8N0V1 137 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 NKAPQ8N5F7 415 aaKnown RBP18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 RERGQ96A58 199 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 LRRC1Q9BTT6 524 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 YIPF2Q9BWQ6 316 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 SMYD2Q9NRG4 433 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 ARL15Q9NXU5 204 aa18.16■□□□□ 0.5
TRAPPC3-204ENST00000373166 LOC105369274A0A096LPK9 316 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 IGKV1-8A0A0C4DH67 115 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 LOC102723532A0A0G2JNH3 316 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 OR5H15A6NDH6 313 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 SLC19A2O60779 497 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 PRAMEF2O60811 474 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 ESRRAP11474 423 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 HRH2P25021 359 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 STX2P32856 288 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 MAGEA4P43358 317 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 TAS2R39P59534 338 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 EEF1A2Q05639 463 aaKnown RBP18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 TRADDQ15628 312 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 ABHD17BQ5VST6 288 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 C3orf62Q6ZUJ4 267 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 OR4N4Q8N0Y3 316 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 PDLIM5Q96HC4 596 aaKnown RBP18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 CABS1Q96KC9 395 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 CPNE1Q99829 537 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 ATG10Q9H0Y0 220 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 POPDC3Q9HBV1 291 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 C14orf105Q9NVL8 296 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 TRPC4Q9UBN4 977 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 TEKT2Q9UIF3 430 aa18.15■□□□□ 0.5
TRAPPC3-204ENST00000373166 FAM159BA6NKW6 160 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 H0YGG7 62 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 PIAS1O75925 651 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 HEXBP07686 556 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 CAPN3P20807 821 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 EMP3P54852 163 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 ARF3P61204 181 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 GUCY2DQ02846 1103 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 SRSF11Q05519 484 aaKnown RBP18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 DSG2Q14126 1118 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 ZNF460Q14592 562 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 FAAH2Q6GMR7 532 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 CAPN13Q6MZZ7 669 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 CYS1Q717R9 158 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 CTAGE3PQ8IX95 158 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 CSNK1A1LQ8N752 337 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 ATL1Q8WXF7 558 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 ALKBH8Q96BT7 664 aaKnown RBP18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 MVB12AQ96EY5 273 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 TSPAN17Q96FV3 270 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 C10orf90Q96M02 699 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 MCMBPQ9BTE3 642 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 GPAMQ9HCL2 828 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 STMN3Q9NZ72 180 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 MYO7BQ6PIF6 2116 aa18.14■□□□□ 0.49
TRAPPC3-204ENST00000373166 CCDC168Q8NDH2 2452 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 CTAGE15A4D2H0 777 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 NPEPPSL1A6NEC2 478 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 CXorf49A8MYA2 514 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 HAT1O14929 419 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 CELA2AP08217 269 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 CTAGE8P0CG41 777 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 ITGAMP11215 1152 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 GP5P40197 560 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 GPX6P59796 221 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 ADORA2A-AS1P86434 159 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 POU4F1Q01851 419 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 RELAQ04206 551 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 NAE1Q13564 534 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 PRTGQ2VWP7 1150 aa18.13■□□□□ 0.49
TRAPPC3-204ENST00000373166 FBXO42Q6P3S6 717 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms