RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 ZCCHC10Q8TBK6 192 aa16.98■□□□□ 0.31
TRAPPC3-202ENST00000373162 BRIX1Q8TDN6 353 aaKnown RBP16.98■□□□□ 0.31
TRAPPC3-202ENST00000373162 RHBDF1Q96CC6 855 aa16.98■□□□□ 0.31
TRAPPC3-202ENST00000373162 UBXN10Q96LJ8 280 aa16.98■□□□□ 0.31
TRAPPC3-202ENST00000373162 CYTH2Q99418 400 aa16.98■□□□□ 0.31
TRAPPC3-202ENST00000373162 ILKAPQ9H0C8 392 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC3-202ENST00000373162 HCN3Q9P1Z3 774 aa16.98■□□□□ 0.31
TRAPPC3-202ENST00000373162 ZFP69BQ9UJL9 534 aa16.98■□□□□ 0.31
TRAPPC3-202ENST00000373162 NAALAD2Q9Y3Q0 740 aa16.98■□□□□ 0.31
TRAPPC3-202ENST00000373162 NOTCH2Q04721 2471 aa16.98■□□□□ 0.31
TRAPPC3-202ENST00000373162 DOPEY1Q5JWR5 2465 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 PRAMEF4O60810 478 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 SEMA7AO75326 666 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 TBX6O95947 436 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 GSTA2P09210 222 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 SLC35G6P0C7Q6 338 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 C8orf89P0DMQ9 161 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 ITGAMP11215 1152 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 GRK3P35626 688 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 CALCOCO2Q13137 446 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 C18orf21Q32NC0 220 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 PRAMEF9Q5VWM5 478 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 FAAH2Q6GMR7 532 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 RPUSD3Q6P087 351 aaKnown RBP16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 NXPE4Q6UWF7 544 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 PLPP5Q8NEB5 264 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 OR5T3Q8NGG3 340 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 CREB3L4Q8TEY5 395 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 TSNARE1Q96NA8 513 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 CPNE1Q99829 537 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 TMEM79Q9BSE2 394 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 TUBB6Q9BUF5 446 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 CAB39LQ9H9S4 337 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 ANKHQ9HCJ1 492 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 GPAMQ9HCL2 828 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 SLC22A14Q9Y267 594 aa16.97■□□□□ 0.31
TRAPPC3-202ENST00000373162 OR2W5A6NFC9 320 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 TAPBPO15533 448 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 OR1F1O43749 312 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 B3GALT4O96024 378 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 ALOX12P18054 663 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 SAT1P21673 171 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 CXCR2P25025 360 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 CASQ1P31415 396 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 GGT5P36269 586 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 GP5P40197 560 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 HNMTP50135 292 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 ZNF169Q14929 603 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 TGFBIQ15582 683 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 H3F3CQ6NXT2 135 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 SLCO4C1Q6ZQN7 724 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 ANKRD37Q7Z713 158 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 UTP15Q8TED0 518 aaKnown RBP16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 OR1F2PQ96R84 312 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 YIPF2Q9BWQ6 316 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 SLC29A3Q9BZD2 475 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 RNF32Q9H0A6 362 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 EPS8L2Q9H6S3 715 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 LRRC4CQ9HCJ2 640 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 ZDHHC18Q9NUE0 388 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 CTNNAL1Q9UBT7 734 aa16.96■□□□□ 0.31
TRAPPC3-202ENST00000373162 UNC79Q9P2D8 2635 aa16.96■□□□□ 0.3
TRAPPC3-202ENST00000373162 WIPF3A6NGB9 483 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 ZNF860A6NHJ4 632 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 PHGDHO43175 533 aaKnown RBP16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 NDUFS4O43181 175 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 CD1DP15813 335 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 IL10P22301 178 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 CAV1Q03135 178 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 E2F2Q14209 437 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 CSHL1Q14406 222 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 HERC3Q15034 1050 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 TLR1Q15399 786 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 NR6A1Q15406 480 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 CDKL4Q5MAI5 379 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 ZNF324BQ6AW86 544 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 PLAG1Q6DJT9 500 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 LINC00696Q6ZRV3 163 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 CPEB2Q7Z5Q1 589 aaKnown RBP16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 TMPRSS11BQ86T26 416 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 CATSPER1Q8NEC5 780 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 DNAJB14Q8TBM8 379 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 HAS2Q92819 552 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 PTGFRNQ9P2B2 879 aa16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 COPG1Q9Y678 874 aaKnown RBP16.95■□□□□ 0.3
TRAPPC3-202ENST00000373162 IGHV3-20A0A0C4DH32 117 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 EPORP19235 508 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 GMPRP36959 345 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 GDF5P43026 501 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 TNFSF10P50591 281 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 PLTPP55058 493 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 DLG1Q12959 904 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 OR4D1Q15615 310 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 KBTBD12Q3ZCT8 623 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 DEFB134Q4QY38 66 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 IRAK1BP1Q5VVH5 260 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 C3orf62Q6ZUJ4 267 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 SIRT6Q8N6T7 355 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 PDPRQ8NCN5 879 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 WDR34Q96EX3 536 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms